Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0041 |
Symbol | |
ID | 5200500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 41890 |
End bp | 42510 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640579578 |
Product | hypothetical protein |
Protein accession | YP_001260552 |
Protein GI | 148552970 |
COG category | [S] Function unknown |
COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00622205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCG AGATCGAAGA CTTCTTCACG CGCGGTTGCG GGCGCTGCGA CCGGTTCGAC ACGCCCGACT GCTCGGCGCG GCATTGGGAG CAAGGGCTCG CCAGGCTCCG CGAGATCTGC CGGAGCGCGG GCCTTGAGGA GACGGTGAAA TGGGGCCATC CCTGCTACAT GCACGCGGGC CGCAACATCG CGATCATGGG GGCGCTGCGG GGCGACTTCC GGCTGAGCTT CATGAACGCG GCGCTGCTCA AGGACTCCGA AGCCGTGCTC GAACGGCAGG GGCCGAACAC CCGGCACCCG GACATGATCC GCTTCACCGC CAGCGGCGAC GTCGACCGGC TCGAACCCGT CATCCGCGCC TATCTCGGCG AGGCGATGGA CTATGCGGCG AAAGGCGTGA AGCCGCCCAG GGACGATAGC GAGCCCGACG CGCCGCCCGA ATTGTCCGAG GCGCTCGACG CCGATCCGGA GCTGGCCGAG GCGTTCCACG CCCTGACCCC CGGCCGCCGG AAGAGCTACG TCATCAATCT CAATTCGGCG AAGCAGTCCG AAACGCGGGT GAAGCGCATC GCCGGCTTCC GAGACAAGAT CATGGCCGGC AAGGGCGCGA TGGAGCGCTA A
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Protein sequence | MITEIEDFFT RGCGRCDRFD TPDCSARHWE QGLARLREIC RSAGLEETVK WGHPCYMHAG RNIAIMGALR GDFRLSFMNA ALLKDSEAVL ERQGPNTRHP DMIRFTASGD VDRLEPVIRA YLGEAMDYAA KGVKPPRDDS EPDAPPELSE ALDADPELAE AFHALTPGRR KSYVINLNSA KQSETRVKRI AGFRDKIMAG KGAMER
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