| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0028 |
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| Symbol | |
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| ID | 5200447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 27309 |
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| End bp | 28004 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579565 |
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| Product | aquaporin Z |
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| Protein accession | YP_001260539 |
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| Protein GI | 148552957 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
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| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0322686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.857355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAGGA AGCTTGCAGC AGAATTGTTC GGAACCTTCT GGCTGGTGTT CGGCGGATGC
GGCTCGGCCG TGCTCGCCGC GGCATTCCCG GAACTCGGCA TCGGGTTCGC GGGCGTCGCC
CTCGCCTTCG GCCTGACCGT GCTGACCATG GCCTATGCGG TCGGCGGCAT CTCCGGCGGG
CATTTCAACC CGGCGGTCTC GCTCGGCGCC GCCGCCGCCG GCCGCCTGCC GTGGAAGGAC
CTGGTCCCCT ATTGGGTCGC GCAGGTCGTG GGCGCGATCG CCGCCGCCGC CGTGCTCTAC
GCGATCGCGT CGGGCAAGCC GGGCTTCGAA GCCGGCGGCT TCGCCTCCAA CGGCTATGAC
GCGCTGTCGC CGGGCGGCTA CAGCCTGCAC GCGGCGCTGC TGATCGAGAT CGTCCTGACG
GCCGGCTTCA TCATCGTCAT CCTCGGGTCG ACCTCGTCGC TGGTCCCGGC CGGCTTCGCG
CCGATCCCGA TCGGCCTCGC GCTCACCCTG ATCCACCTGA TCTCGATCCC GGTGACCAAC
ACCTCGGTCA ATCCGGCGCG CTCGACCGGC GTCGCGCTGT TCGCGACCAC CGACGCGCTC
GGCCAGCTCT GGCTGTTCTG GGCGGCGCCG CTGGTCGGAG CCGTGATCGG CGCGCTGATC
TGGCGCTTCC TGCTCGCCTC GCCCGACGAG GCTTGA
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| Protein sequence | MTRKLAAELF GTFWLVFGGC GSAVLAAAFP ELGIGFAGVA LAFGLTVLTM AYAVGGISGG
HFNPAVSLGA AAAGRLPWKD LVPYWVAQVV GAIAAAAVLY AIASGKPGFE AGGFASNGYD
ALSPGGYSLH AALLIEIVLT AGFIIVILGS TSSLVPAGFA PIPIGLALTL IHLISIPVTN
TSVNPARSTG VALFATTDAL GQLWLFWAAP LVGAVIGALI WRFLLASPDE A
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