Gene Swit_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0021 
Symbol 
ID5200438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp20286 
End bp20603 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content68% 
IMG OID640579558 
Productexodeoxyribonuclease VII, small subunit 
Protein accessionYP_001260532 
Protein GI148552950 
COG category[L] Replication, recombination and repair 
COG ID[COG1722] Exonuclease VII small subunit 
TIGRFAM ID[TIGR01280] exodeoxyribonuclease VII, small subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.804691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCCAG AAGGGCCCGC GCATCCCAAC CCATCCTTGA CCCTGCCGCC GCCCGAGCCC 
AAAAGCCTTG CCATGACCGA CAGCGCCGCC CTTGCCGACC TCTCCTTCGA GGACGCCCTC
AAGCAGCTCG AAACGATCGT CCGCCAGCTC GAATCGGGTG AGGTTCCCCT CGACGAATCG
ATCTCGCTCT ACGCGAAGGG CGATGCGCTG AAGCGGCTGT GCGAGGAACG GCTGAACGCC
GCCAAGGCGC GGATCGAGAA GATCAGCCTG GGCGCCGACG GCGCGCCGCG GGGGACCGAG
CCCTTCACCG CGAGCTGA
 
Protein sequence
MRPEGPAHPN PSLTLPPPEP KSLAMTDSAA LADLSFEDAL KQLETIVRQL ESGEVPLDES 
ISLYAKGDAL KRLCEERLNA AKARIEKISL GADGAPRGTE PFTAS