Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0013 |
Symbol | |
ID | 5200617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 13318 |
End bp | 14364 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640579550 |
Product | alanine racemase |
Protein accession | YP_001260524 |
Protein GI | 148552942 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.326952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCAAG AGTTCCTCCC CCTCCGCCTC GATCTCGATC CGCAGGCCCT CGTGGCCAAC TGGCGCTGGC TCGGCGAGCG GGCGGCGGCG CCTGCCGGGG CGGCGATCAA GGCCGACGCC TATGGGCTCG GCGCGGTCGA GGTGTCGCGC CGGCTCGCCG ACGCCGGGTG CCGCGACTTC TTCGTCGCGA CCTGGGCGGA GACCGAGGCG CTCGGCTCGC TGCCGTTCGG CGCCGGCCTG TCGGTGCTCC ACGGCCTGCG CGAGGAGGAC CTCGCGGCGG CGCTCGCCTC GCGCGCCCGG CCGGTGCTCA ACAGCCCGGC GATGGTCGCG CGCTGGAAAG CGGCGGCGCC GGGACGGCCG TGCGACGTGA TGATCGACAC CGGCATGAAC CGGCTCGGCC TCACCGTCGA GGAAGCTTGT TCGGGCCTGC TCGACGGGCT GGAGATCGAC CTGCTGCTCA GCCATCTCGC CTGCGCCGAC GAGCCCGACA GCCCGATGAA CGAGCGCCAG CGCGCGCGCT TCGTCGATCT GCGCGGGCGG GTGGCGGCGA AGCGCCATAG CCTCGCCAAT TCGGCGGGCG CCTGCCTGGG CCCCGCTTAC GGCTTCGACC TGATCCGCCC CGGCATCGCG CTCTATGGCG GCATCCCCCG GCCCGAGGCG CGGGGCCATA TCGTCCGCGT CGTCCGGATC GAGGCGCAGG TGCTCCAGGT CCGCGACGTG CCGGCCGGCG ACACGATCGG CTATGGCGCG ACCTTCACGG CGGAGCGGCC GATGCGCGTC GCGATCCTCA ACCTCGGCTA TGCGGACGGC TATCTCCGCG CCTTCGCCGG GAATGGCGCG GCGCTGGTGA ACGGGCGGCG CTGCCCGCTC GCCGGGCGCG TGTCGATGGA CCTGATCGCG GTCGATCTCA CCGGGGCCGA TGCCGCCGAG GGCGACTGGC TGGAGATCGA CTATGCGCTC GAAAGCGCCG CCGATCGGAC CGGACTTTCG CAATATGAGT TGCTGACCGG GCTGGGCAGT CGCTATCAGC GGCGGTGGAA AGAGTAG
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Protein sequence | MTQEFLPLRL DLDPQALVAN WRWLGERAAA PAGAAIKADA YGLGAVEVSR RLADAGCRDF FVATWAETEA LGSLPFGAGL SVLHGLREED LAAALASRAR PVLNSPAMVA RWKAAAPGRP CDVMIDTGMN RLGLTVEEAC SGLLDGLEID LLLSHLACAD EPDSPMNERQ RARFVDLRGR VAAKRHSLAN SAGACLGPAY GFDLIRPGIA LYGGIPRPEA RGHIVRVVRI EAQVLQVRDV PAGDTIGYGA TFTAERPMRV AILNLGYADG YLRAFAGNGA ALVNGRRCPL AGRVSMDLIA VDLTGADAAE GDWLEIDYAL ESAADRTGLS QYELLTGLGS RYQRRWKE
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