Gene Swit_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0010 
Symbol 
ID5200782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp8740 
End bp10554 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content74% 
IMG OID640579547 
Producthypothetical protein 
Protein accessionYP_001260521 
Protein GI148552939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCA GGCCAAGTAA GAAGGCCTTC CTCGCGCTGA CGGCGGGTGC GGCCTCGCTG 
GCCGCGGTCG CCGCGTTCGC GCAGGAATCG CTGCTGCCGC CCGGCTTCGG CAACCAGCCG
CCGCCGGCCA ATCGGCCGCA GCCGGCCGCC CCCGCGCCGG CCCAGCCGGC CGCCGGCCCG
ACGCAGGCGG CACCGGCCGC GCCCGGCGCG TCGGTTGCGC CCACGCTGAC GCTCGACCCC
GCCATCTTCG CGTCGGCCGA GCCCGATGCG CCGGTCGTCC CGGTCGAGGA GCTGCCGCCT
TCGGCGCGCC GCTCGATCGA CGCGGTCGGG CCGCTCGCGG GCTTCGGGCC CAATGCCTGG
GGCATGGCCG ACGGCCGCTT CCTTTCCGCG CTGATGCGGC GGCTGGACGT GCCGATCGCC
TCGCGCTGGG CTTCGATCAC GCTGCGCCGC GCGCTGCTGA CCCGGGTGGG TACGCCGGAC
AATGTCTCGG CGCCCGACTG GATCGCCGAA CGGGCCTGGC TGCTGCTCCG GATGGGCGAG
GCGGACGGCG CGCGGATGCT GATCGAGGGC GTCGACGTCG ATCGCTTCAA CGCCAAGCTC
TACACCGTCG CGGGGCAGAG CGCGCTCGCC GGCGCCGACG CGGCGGGGCT CTGCGCGCTG
GCCGACGGCG GCGCGATCCG CAGCCGCGAG GCGGTCTGGC CGATGGCGCG GGCGATCTGC
GCGGCGCTGT CGGGCGACAC CGCGATCGCC GACGTGCTGA TGGACCAGGC GCGCCGCCGG
ACCAGCAATC CGCAGGGCAT CGACGTCCAG CTCGCCGAAC GGATGATGGG CGTCAACGGC
GCCGGCCGGC GCAGCATCAG CGTCGAATGG ACCGGGGTCA ACCAGCTCAC CGCCTGGCGC
TTCGGCATGG CGAGCGCGCT CGGCCTGACC ATCCCGGCCG ATCTCTACCG CACGGTCGGC
CCGCAGGTGG TGGCGTGGAG CGCGCGGGCG CCGATGATCC CGCCGGCCGA GCGGCTCGAT
GCGGCGATGA CGGCGGCGCG GCTCGGCGTC TTCTCCAATT CGGCGCTGGT CGACCTCTAC
GCGCAGGCCG CCGACGAGAG CGGCGACTTC TCCAGCGACA CCCCGGCCGG CCGGCTGCGC
CTCTGCTATG CGGGCGACGA TGCCGGCGCG CGCCTCTCGG CGATGCGGGG CTTCTGGAGC
GGCGAAGGGC AGGGCGACGG CAAGCAGGTC GACCGCTATG CCGGGCTGAT CCTGACGGCC
CGCGCGGCGG CGCGCATCGC GCCCGACAGC GATCATGTCT CCGACGCGGC CGGCCTGATC
GGGTCGATGA TGTCGGCCGG GCTCGACCGC AAGGCGGCGG CCTGGGCGCC GATCGTCTCC
GGCATGTCGG CGGGCAAGGG CGACGACGCC TGGGCGATCC TCGCGGTCGG CACGCCGCGC
GCCGTCGTCG ACGTCTCGGC CGACCGGCTG TCGGCGGTCG CCGACCGCTG GAGCGCGGAG
AACCCGCAGA AGCTGCGCCT GCTGCTCGCC GCGCTCGCCG GGCTCGACCG GTTGCAGACC
GAGGAGCAGA TGCGCCTGCT GCAGGAATAT CAGGTCGGGT TCGACAATCG CAGCAACTGG
GGCCGGCTGC TGCTGCAGGC CGCCGACCGC AAGGAGCCGG CGACGGTGGC GCTGCTGGTC
GCGGTCGGGA TGCAGAAGAC CGGCTGGAGC GGCCTGTCCT CGGCGATGTT CGCGACGATG
ATCCGCGCGC TGCACGACGT CGGTCTCGAC GGCGAGGCGC GGATGATCGC GGCCGAGGCG
ATGACCCGCT TGTAA
 
Protein sequence
MKPRPSKKAF LALTAGAASL AAVAAFAQES LLPPGFGNQP PPANRPQPAA PAPAQPAAGP 
TQAAPAAPGA SVAPTLTLDP AIFASAEPDA PVVPVEELPP SARRSIDAVG PLAGFGPNAW
GMADGRFLSA LMRRLDVPIA SRWASITLRR ALLTRVGTPD NVSAPDWIAE RAWLLLRMGE
ADGARMLIEG VDVDRFNAKL YTVAGQSALA GADAAGLCAL ADGGAIRSRE AVWPMARAIC
AALSGDTAIA DVLMDQARRR TSNPQGIDVQ LAERMMGVNG AGRRSISVEW TGVNQLTAWR
FGMASALGLT IPADLYRTVG PQVVAWSARA PMIPPAERLD AAMTAARLGV FSNSALVDLY
AQAADESGDF SSDTPAGRLR LCYAGDDAGA RLSAMRGFWS GEGQGDGKQV DRYAGLILTA
RAAARIAPDS DHVSDAAGLI GSMMSAGLDR KAAAWAPIVS GMSAGKGDDA WAILAVGTPR
AVVDVSADRL SAVADRWSAE NPQKLRLLLA ALAGLDRLQT EEQMRLLQEY QVGFDNRSNW
GRLLLQAADR KEPATVALLV AVGMQKTGWS GLSSAMFATM IRALHDVGLD GEARMIAAEA
MTRL