Gene Swit_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0004 
Symbol 
ID5196932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4078 
End bp4431 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content73% 
IMG OID640579541 
Producthypothetical protein 
Protein accessionYP_001260515 
Protein GI148552933 
COG category[S] Function unknown 
COG ID[COG2363] Uncharacterized small membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.230025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGG CTAGGACGTT GGGAGATCCG CTGGCGGCGC TGTTCGCGCT GTCCGGCGCG 
GTGGCGGTGG TCGCGGGCGC CTATGGCGCG CACGGGGCCA GCGGCAAGGC GGCCGAATGG
CTGGCGACCG GGGCGGAATA TCAGATGATC CACGCCGTCG CGGGGCTCGT CGTGCTGGCG
AAGGGACGCG GCGCGGCGGC GCTGTTGCTG CTCGGCGCGC TGCTCTTCTC GGGCACGCTC
TACGCGATGG CGCTGGGCGG TCCGCGCTGG CTCGGCGCGG TCACCCCGCT CGGCGGCCTC
GCGATGATCC TCGGCTGGAT CTGGATCGCG ATCCTCTATT TGCGGGGACG GTAG
 
Protein sequence
MARARTLGDP LAALFALSGA VAVVAGAYGA HGASGKAAEW LATGAEYQMI HAVAGLVVLA 
KGRGAAALLL LGALLFSGTL YAMALGGPRW LGAVTPLGGL AMILGWIWIA ILYLRGR