Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5107 |
Symbol | |
ID | 5195965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 217580 |
End bp | 218437 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579533 |
Product | IstB ATP binding domain-containing protein |
Protein accession | YP_001260481 |
Protein GI | 148551051 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1484] DNA replication protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 0.269436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.115979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCA TTGCCCCATC CACCCGTGTC GACTCCATCC GCCGGAGCCT CGTCAGCCTC AAGATGCCCC GGGCGCTCGA GATCCTCGAT GCGACCCTGC GCCGTATCGA ACAGGGCCAG ATCGACGGCA TCGAAGCGCT CGACGAGCTG CTGGGCGAGG AGCTGTCGCT GCGCGAGAAC CGGCGGATCA AGGCCGCTCT GCGCATGGCG CGCCTGCCTG TGGTGAAGAC CCTGGCGGGC TACGACTTCT CGTTCCAGCC CTCGCTCGAC AGGAACCGCA TCCTCGCGCT CGCCGGCCTC GACTTCATAG AGCGCGCCGA GGTCGTCCAC CTGCTGGGAC CGCCCGGCAC CGGCAAAAGC CACATTGCCA CCGCACTCGC GGTCGAGGCC GTGCGCGCCG GCAAGGCGGT CTACTTCATC CCGCTCGCCG ACCTCATCGC CCAACTCACC AAGGCCGAAC GCGAAGGCAC GCTCCGGGAG AAGATCCGCT TCCTCGCCAG GGCATCGCTG CTGGTTGTCG ACGAGATCGG ATACCTGCCG GTCACACCGG GTGGTGCGAA CCTGTTCTTC CAGCTCGTCA ACGCCCGCTA CGAAAAGGGC GCCATGATCC TCACCTCCAA TCGCGGCTTC GCCGAATGGG GCGAAGTGTT CGGCGATCCC GTCGTTGCCA CCGCGCTGCT CGACAGGCTG CTGCACCATG CCGTGGTCAT CCAGATCGAA GGTTCCAGTT ATCGCATGCG TGAGCACGCC GCGCTCGTCC CCGAAAACGT CCGCGCCGGC GTCGCGTTCA ATCCACCCCA AGGTAAGCGC CGCGGACGAC CACCAAAGAA AGCCAATCCC GATCCCGATT ACGGCTGA
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Protein sequence | MNAIAPSTRV DSIRRSLVSL KMPRALEILD ATLRRIEQGQ IDGIEALDEL LGEELSLREN RRIKAALRMA RLPVVKTLAG YDFSFQPSLD RNRILALAGL DFIERAEVVH LLGPPGTGKS HIATALAVEA VRAGKAVYFI PLADLIAQLT KAEREGTLRE KIRFLARASL LVVDEIGYLP VTPGGANLFF QLVNARYEKG AMILTSNRGF AEWGEVFGDP VVATALLDRL LHHAVVIQIE GSSYRMREHA ALVPENVRAG VAFNPPQGKR RGRPPKKANP DPDYG
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