Gene Swit_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5105 
Symbol 
ID5195874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp215267 
End bp216139 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID640579531 
Producthypothetical protein 
Protein accessionYP_001260479 
Protein GI148551049 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.262443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCAACC GTCGCTTCCT GGTGATGGCG GACCACTATA TGATCGAGCC AACCGCGTGC 
TCGCCGGCGG CCGGCTGGGA GAAGGGTCAG GTCGAGCACC AGGTGCAGAC GATACGGGGG
CGCTTCTTCA AGCCCAGGCT GCGGTTCGCC AGTCTGGAGG AGCTGAACGG CTGGCTGGAG
GCCGAGTGCC TGCGCTGGGC AGCGATGCAT GCGCACCCCG AGCACAAGGA GATGACGGTC
GCGCAGGCGC TGGAGTTGGA ACGGCCTGCG CTACAGCCGA TGCTCGCACC GTTCGACGGC
TTCCATGAGA CGCAGCACGC GGTCAGCGGG ACCTGCCTGA TCAGCTTCGA CCGGAACCGC
TACTCGGTTG CCGCCAAGGC CGTGCGTCGT GCAGTCCAGG TCCGCGCCTA TGCCGACCGG
ATCGTCGTAC GGATGGGCAA CGAGGTCATC GCCGATCATC GCCGCTTCTT CGGCCGCGAC
CGGACGATCT ACGATCCGTG GCATTATCTG CCGGTGCTGG TGAACAAGCC CGGTGCGCTG
AGGAACGGGG CGCCGTTCCA GGACTGGGAT CTGCCGCCTG CGCTCGCTCG GCTGCGGCGC
AAGCTGGGCA ACGACGATGA CGCCGATCGA CGCTTCGTAC GGGTGCTCGC CGCCGTGTTG
AGCGATGGCC TGGATGCCGT CGAGAGCGCG GTTCGCGAAG CGCTCGACGC CGGCGCTGTC
AGCGACGAGG TCGTGCTCAA CATCCTGTCA CGACGGCGAG AGCCACCCCG GCCCGCGTCC
ATCGTCACGC CCGAGGATCT GGCGCTGATG CACCCGCCGA TCGCCGACTG CGCCCGCTAC
GACAGCCTGC GAGGTATCCG TGCAGCGGCA TGA
 
Protein sequence
MFNRRFLVMA DHYMIEPTAC SPAAGWEKGQ VEHQVQTIRG RFFKPRLRFA SLEELNGWLE 
AECLRWAAMH AHPEHKEMTV AQALELERPA LQPMLAPFDG FHETQHAVSG TCLISFDRNR
YSVAAKAVRR AVQVRAYADR IVVRMGNEVI ADHRRFFGRD RTIYDPWHYL PVLVNKPGAL
RNGAPFQDWD LPPALARLRR KLGNDDDADR RFVRVLAAVL SDGLDAVESA VREALDAGAV
SDEVVLNILS RRREPPRPAS IVTPEDLALM HPPIADCARY DSLRGIRAAA