Gene Swit_5088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5088 
Symbol 
ID5195900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp199722 
End bp200042 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content55% 
IMG OID640579517 
Productferredoxin 
Protein accessionYP_001260465 
Protein GI148551035 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones80 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAG TTGTTTTTGT AGCTGCGGAT GGTCGCGAGA TCGAAACGAA TGTCGATATC 
GGCACTGACC TGATGCATGC TGGTCTCTAC AATAGCGTAC CTGGCCTGCT TGGGGAATGC
AGTGGCGGTT TAGCGTGTGC AACCTGCCGT GTTCACGTCC CTGCCGAATG GCAAGGCGTG
TTGCCTGCGG CGCTTCCTGC AGAAGCGGAA TTGCTCGGAT TTTGCGAGGA GTCGCCTCCC
GAGGCACGAT TGTCCTGCCA GATCAAAATG ACCCAAGAAC TTGATGGTCT CAGGTTGCTG
GTGCCCGAAG ACCAAGATTA A
 
Protein sequence
MPKVVFVAAD GREIETNVDI GTDLMHAGLY NSVPGLLGEC SGGLACATCR VHVPAEWQGV 
LPAALPAEAE LLGFCEESPP EARLSCQIKM TQELDGLRLL VPEDQD