Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5077 |
Symbol | |
ID | 5195890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 193636 |
End bp | 194436 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640579508 |
Product | integrase catalytic subunit |
Protein accession | YP_001260456 |
Protein GI | 148551026 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 70 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTGGAACC GCATCGGCGA CGACATCCAG GACCAGATCG TGGAACTGGC GCTGGAAGAG ACCGATCTGA GCCCCCGCGA ACTGGCGGTG CGCTTCACCG ACGAGAAGCG CTACTTCGTG TCGGAATCGA CGGTTTACCG TCTGCTGAAG GCCCATGATC TGATCACCAG CCCGGCCTAT GTCGTGATCA AGGCCGCCGA TCAGTTCCAC ACCAAGACCA CCCGGCCGAA CGAGATGTGG CAGACTGATT TTACCTACTT CAAGATCATC GGTTGGGGCT GGATGTACCT GTCGACCGTG CTCGACGACT TCTCGCGCTA CATCATTGCC TGGAAGCTGT GCACCAACAT GCGAGCCGAG GACGTGACCG ACACGCTGGA CCTCGCGCTC AAGGCCTCGA GCTTGGACAG CGCCACCGTG CTGCACAAGC CCAGGCTGCT CAGCGATAAC GGCCCCAGCT ACATCGCGGG CGAACTGGCG GAATATATCG AGGCCCGGAA AATGAGCCAT GTGCGCGGCG CTCCGATGCA TCCCCAGACC CAGGGCAAGA TCGAACGCTG GCACCAGACC CTGAAAAACC GCATCCTGCT GGAAAATTAC TTCCTGCCCG GCGACCTCGA AGCCCAGATC GAGGCCTTCG TCGAGCACTA CAACCACCAG CGTTACCACG AGAGCCTGAA CAACGTGACG CCCGCCGATG CCTACTTAGG CAGGGCGCCG GCGATCATCC AACAGCGTGA AAGGATCAAG CGACAGACCT TCGAACATCG GCGCTTGCAA CACCGCAAGC TCGCCGACTA A
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Protein sequence | MWNRIGDDIQ DQIVELALEE TDLSPRELAV RFTDEKRYFV SESTVYRLLK AHDLITSPAY VVIKAADQFH TKTTRPNEMW QTDFTYFKII GWGWMYLSTV LDDFSRYIIA WKLCTNMRAE DVTDTLDLAL KASSLDSATV LHKPRLLSDN GPSYIAGELA EYIEARKMSH VRGAPMHPQT QGKIERWHQT LKNRILLENY FLPGDLEAQI EAFVEHYNHQ RYHESLNNVT PADAYLGRAP AIIQQRERIK RQTFEHRRLQ HRKLAD
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