Gene Swit_5077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5077 
Symbol 
ID5195890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp193636 
End bp194436 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content60% 
IMG OID640579508 
Productintegrase catalytic subunit 
Protein accessionYP_001260456 
Protein GI148551026 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGAACC GCATCGGCGA CGACATCCAG GACCAGATCG TGGAACTGGC GCTGGAAGAG 
ACCGATCTGA GCCCCCGCGA ACTGGCGGTG CGCTTCACCG ACGAGAAGCG CTACTTCGTG
TCGGAATCGA CGGTTTACCG TCTGCTGAAG GCCCATGATC TGATCACCAG CCCGGCCTAT
GTCGTGATCA AGGCCGCCGA TCAGTTCCAC ACCAAGACCA CCCGGCCGAA CGAGATGTGG
CAGACTGATT TTACCTACTT CAAGATCATC GGTTGGGGCT GGATGTACCT GTCGACCGTG
CTCGACGACT TCTCGCGCTA CATCATTGCC TGGAAGCTGT GCACCAACAT GCGAGCCGAG
GACGTGACCG ACACGCTGGA CCTCGCGCTC AAGGCCTCGA GCTTGGACAG CGCCACCGTG
CTGCACAAGC CCAGGCTGCT CAGCGATAAC GGCCCCAGCT ACATCGCGGG CGAACTGGCG
GAATATATCG AGGCCCGGAA AATGAGCCAT GTGCGCGGCG CTCCGATGCA TCCCCAGACC
CAGGGCAAGA TCGAACGCTG GCACCAGACC CTGAAAAACC GCATCCTGCT GGAAAATTAC
TTCCTGCCCG GCGACCTCGA AGCCCAGATC GAGGCCTTCG TCGAGCACTA CAACCACCAG
CGTTACCACG AGAGCCTGAA CAACGTGACG CCCGCCGATG CCTACTTAGG CAGGGCGCCG
GCGATCATCC AACAGCGTGA AAGGATCAAG CGACAGACCT TCGAACATCG GCGCTTGCAA
CACCGCAAGC TCGCCGACTA A
 
Protein sequence
MWNRIGDDIQ DQIVELALEE TDLSPRELAV RFTDEKRYFV SESTVYRLLK AHDLITSPAY 
VVIKAADQFH TKTTRPNEMW QTDFTYFKII GWGWMYLSTV LDDFSRYIIA WKLCTNMRAE
DVTDTLDLAL KASSLDSATV LHKPRLLSDN GPSYIAGELA EYIEARKMSH VRGAPMHPQT
QGKIERWHQT LKNRILLENY FLPGDLEAQI EAFVEHYNHQ RYHESLNNVT PADAYLGRAP
AIIQQRERIK RQTFEHRRLQ HRKLAD