| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5064 |
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| Symbol | |
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| ID | 5196016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 179040 |
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| End bp | 179681 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579496 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001260444 |
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| Protein GI | 148551014 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 0.648557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGGCG GTTTCGGCCT GTCGGGCAAT CCCGAAAGCC TGATACCGCA AGTACGCGCA
AGCGGCGTGA AGGAGTTGAC CGTCATCTCC AACAACGCCG GCGCAGATGG CTTCGGCCTC
TGGACGCTGC TGGAAAGCCG ACAGGTACGG AAGATGATTT CCTCCTATGT CGGGGAAAAC
AAGCTGTTCG AGAGCCAGTA TCTGTCGGGC GAGCTGGAAC TGGAGCTGAA TCCGCAAGGC
ACACTGGCCG AGCGTATCCG GGCGGGCGGC GCGGGCATTC CGGCGTTCTA CACCAAGACC
GGCGTCGGCA CGGTCGTTGC CGAAGGAAAG CCGGTAGAGA CATTCGAGGG CGAGGACTAT
ATCCGCGAAA CATGGCTGCG CGCCGACCTT TCGATCATCA AGGCGTGGCG GGCAGATCCG
GCGGGCAACC TGATGTTTCG CAAGACGGCG CGCAACTTCA ACCCGAACAT GGCGACCGCG
GGCATGGTCA CGGTGGTCGA GGTCGAAGAG ATCGTGGCCG AAGGGAGCTT AGACCCTGAC
TGTGTCCACA CCCCCGGCAT CTATGTCGAC CGCATTGTGC TGAGCACCAT CAACGAAAAG
CGGATCGAGC AGTTGACGGT CCGCGAAAGG GAAACGGTAT AA
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| Protein sequence | MSGGFGLSGN PESLIPQVRA SGVKELTVIS NNAGADGFGL WTLLESRQVR KMISSYVGEN
KLFESQYLSG ELELELNPQG TLAERIRAGG AGIPAFYTKT GVGTVVAEGK PVETFEGEDY
IRETWLRADL SIIKAWRADP AGNLMFRKTA RNFNPNMATA GMVTVVEVEE IVAEGSLDPD
CVHTPGIYVD RIVLSTINEK RIEQLTVRER ETV
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