Gene Swit_5062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5062 
Symbol 
ID5195867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp176926 
End bp177984 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content65% 
IMG OID640579494 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001260442 
Protein GI148551012 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGCT TCGTCCACAC AGCCCTTCCC GGTCGCGTCA TCTTTGGCCA TGACACCCTG 
CCCCGCGTCG CAGAGGAAGC GGAACGATCT GGCTTCAAAC GGGCGCTGGT GCTGACGACG
CCGCAGCAAG TCGATCAGGG CAAGGCCGTA CTCGACCTGC TGGGCGAACG CGGATGCACC
CTGTTCGACG GGGCGACGAT GCACACGCCG GTTGAAGTTA CCGAAAGGGC ACTTTCCCTA
TTGGCGGATC ATGGTGCCGA TGGACTGGTA TCGATCGGCG GCGGTTCGAC CATCGGTCTG
GGCAAGGCAC TGGCGCTGCG CACCGGGCTG GACCAGATCG TCATTCCCAC AACCTATGCG
GGTTCGGAGA TGACGTCGAT TCTCGGCGAG ACAAGGGACG GCAAGAAGAC GACTCTCCGA
TCGCCCGACG TGCTGCCGGA AACCGTGATC TACGATGTGA GCCTGACGTA CGGGCTGCCC
ACCGCGATGT CGGTCACATC CGGCATAAAC GCCATCGCCC ATGCCGCCGA AGCGCTCTAC
TCGGCTGAGG TCAGCCCCAT TATCGCCATG ATGGCGCAGG AAGGCATCCG CACGCTTGTC
GAAGCGCTTC CAAGCATTGC GGCCAACCCG CGCGACGCAG CCGCGCGCGA TCTTGCGCTG
CGCGGTTCTT GGCTTTGCGG CACATGTCTG GGCAGCGTCG ACATGGCCCT GCATCACAAG
CTGGCGCATG TGCTGGGCGG CATTTTCGAC CTGCCCCATG CCGAATTGCA CACGGTGCTG
CTTCCCCATG CGCTCGCCTA TAACCTGCCG GCGGCACCCA AGGCGACCGA GCAGTTGCGC
GCAGTCCTCG GCCAAGATCC CGCCACCATT CTGCGCGATC TGGCCGTGCG ACTGGGAGCG
CCGTCGTCGC TTGCGGCGCT GGGCATGCCG CGCGACGGCG TTGATCACGC AACGGTGGCG
GCACTGCAGG CGCGCTATCC AAACCCCCGA ACCCTCGAAG AACAGGGGAT ACGCGGGCTG
CTCGAACGCG CTTGGGCGGG GGATGCTCCC CGCGCTTAG
 
Protein sequence
MIGFVHTALP GRVIFGHDTL PRVAEEAERS GFKRALVLTT PQQVDQGKAV LDLLGERGCT 
LFDGATMHTP VEVTERALSL LADHGADGLV SIGGGSTIGL GKALALRTGL DQIVIPTTYA
GSEMTSILGE TRDGKKTTLR SPDVLPETVI YDVSLTYGLP TAMSVTSGIN AIAHAAEALY
SAEVSPIIAM MAQEGIRTLV EALPSIAANP RDAAARDLAL RGSWLCGTCL GSVDMALHHK
LAHVLGGIFD LPHAELHTVL LPHALAYNLP AAPKATEQLR AVLGQDPATI LRDLAVRLGA
PSSLAALGMP RDGVDHATVA ALQARYPNPR TLEEQGIRGL LERAWAGDAP RA