| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5055 |
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| Symbol | |
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| ID | 5195937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 170815 |
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| End bp | 171714 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640579487 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_001260435 |
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| Protein GI | 148551005 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 0.0251009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG GGATCATCGG CGGCGGGTTG ATGGGAGCCG GCATCGCGCA GGTTTTCGCC
GCAGCTGGCC ATGCGGTGAC GGTCCATGAA CCGGACGCTG CCGCGCGCGG TACGCTGGTC
GAACGGGTGC GCCAGGGGCT GGCGCAGCTC GGCGACGATC CGACGTTTGC AGAGCGTGTT
ACGCCCGTGG AGCATCTGGC CGAGGCCGTA GCGGACGCCG GCTTCGTTAC GGAGGCCGCC
CCTGAGAAGC TGCCGCTCAA GCGCGCCATC TTCGCGCAGC TTGTTGAGGC GGCGCCGGCG
GATGCGATCC TCGCCAGTAA TAGCTCCGTC ATTCCATGCG GCGCGATTGC CGAAGGGTTG
CCGACGGCGC ACCGGATCGT CGGGACGCAC TGGTGGAATC CGGCGACGCT GGTGCCGCTG
GTCGAGGTGA TCCAGGCCCC GGGCACGAGT GAGGAAACAG TCGCCCGGAC AATGGAGCTC
CTCGCCTCCG TCGGGAAAAG GCCGGCCCAT ATTCGCAAGG ATTTGCCCGG CTTTGTCGCC
AACCGTTTGC AGCATGCGCT GTGGCGCGAA GCGATCGCGA TGGTCGCAGA GGGTATTTGC
GATGCCGCCA CGCTGGACGA TTGCGTTAAG CACAGCTTCG GCCTGCGCCT TCCGGTGCTG
GGGCCGCTGG AGAATGCCGA TCTGGTCGGT CTGGACCTGA CGCTCGATAT CCATCGCACG
ATCATGCCCG AACTCGACCG GCACGACCGG CCGCACGAAT TTCTCGAACA GCAGGTCGCG
GAAGGCAGGC TGGGGTTCAA GAGTGGCGAG GGATTCCGAA CATGGAGTCC CGAGGCGATC
CAGGCGGTGC GCGCACGGCT TGTACGCCAT CTGCTCGATG CGCGGAGCGT GGGAACATGA
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| Protein sequence | MRIGIIGGGL MGAGIAQVFA AAGHAVTVHE PDAAARGTLV ERVRQGLAQL GDDPTFAERV
TPVEHLAEAV ADAGFVTEAA PEKLPLKRAI FAQLVEAAPA DAILASNSSV IPCGAIAEGL
PTAHRIVGTH WWNPATLVPL VEVIQAPGTS EETVARTMEL LASVGKRPAH IRKDLPGFVA
NRLQHALWRE AIAMVAEGIC DAATLDDCVK HSFGLRLPVL GPLENADLVG LDLTLDIHRT
IMPELDRHDR PHEFLEQQVA EGRLGFKSGE GFRTWSPEAI QAVRARLVRH LLDARSVGT
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