| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5051 |
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| Symbol | |
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| ID | 5195948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 166360 |
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| End bp | 167280 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579483 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001260431 |
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| Protein GI | 148551001 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 0.443716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.966436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGATT TTTCCGAGCG GCGATTGCGC GCGTTCATGG AGGTGGTGGA AGCGCGCAGC
ATCGGCCGCG CCGCCATCGC CATGAACATG AGCCAGTCGG CGCTCAGCAG GCTGATACAA
GCGCTGGAGG AGATGCATGG CATCGACCTC TTCCAGCGTT TGCCGACTGG GGTAGTATTG
ACTCCTGCTG GCGAGGCGCT GGTTCCTCAC GCCCGCTTAC TGCTGTTCGA GATGCGCCAG
GCCAGCGATT CCTTGCAGGC AATTCGCGGC TTGAAGCGCG GTGTCGCGCG GGTCGGAGCG
GTGGCTGCCA TAACCCGTTC GATCTTGCCA GGTGCCGTAC GCCGAATGCT GGACGAAACG
CCCGGCCTGC TGGTTCAGGT GACCGACTCG CTCGATGACC GGCTGGCCTC TGCCCTTACC
GGCAATCAGA TCGACCTGAT GATCAGCGGC AAGGTCGAGT TGCAGGGCGA AATCCATCTG
GTCGGCGAAT GCCAGTTTGA TGACACATAC AGCATCATCT GCGCCAACGA CCATGCGCTT
GCCAAAGCTT CCACGGTCTC CATCGCGGAT GTCCTGTCAT TGCCTTGGGT GATGCCGCCG
CTCGGCGCCA CGCCGCGCGT CCTGTTTGAG GACATCGTCC GCCGCCTGGG CATGGAAATG
CCGGCTGTCG ATATAGAAAG CAGTTCGCCC AATGCGATCG CATCGTTCGT CATCGGGACG
GGCCGTCTCG GCTGGATGCC GACCCCGTTG TTCACCAACG AACTGAGCGC CGGAAGCGTA
CATCGAATCC GGATAGCGGA GTTCGAACTT GCACGGCGGT TTTTCATCTA TCGTCGCGCC
AAGGGATTGC TGCCGGCCCC TGCGCGCGAA CTTGTGCGGC ATCTTCCCAT GGTCGGCCGA
GATCAAATAC AGCAGTCTTG A
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| Protein sequence | MIDFSERRLR AFMEVVEARS IGRAAIAMNM SQSALSRLIQ ALEEMHGIDL FQRLPTGVVL
TPAGEALVPH ARLLLFEMRQ ASDSLQAIRG LKRGVARVGA VAAITRSILP GAVRRMLDET
PGLLVQVTDS LDDRLASALT GNQIDLMISG KVELQGEIHL VGECQFDDTY SIICANDHAL
AKASTVSIAD VLSLPWVMPP LGATPRVLFE DIVRRLGMEM PAVDIESSSP NAIASFVIGT
GRLGWMPTPL FTNELSAGSV HRIRIAEFEL ARRFFIYRRA KGLLPAPARE LVRHLPMVGR
DQIQQS
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