| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5047 |
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| Symbol | |
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| ID | 5195926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 161267 |
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| End bp | 162868 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579479 |
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| Product | benzoylformate decarboxylase |
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| Protein accession | YP_001260427 |
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| Protein GI | 148550997 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.133347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGTT CACTCATTCA GAACACTGCC TCGACTCCAG CAGCATCAAC CGTCCGCGAC
GTCACGCTTG ACCTGATGCG GTCGCTGGGA ATGACGACAA TCTTCGGCAA TCCGGGGTCG
ACCGAATTGC CGATGTACCG TGATTTCCCC GATGATTTCC GTTATGTACT CGCGCTTCAG
GAATCGGTCG TATTGGGCGT GGCGGATGGC TATGCGCTGG CCACAGGCAA TGCGGCGTTC
ATCAATCTGC ACTCTGCCGC GGGCTTGGGC CACGCACTGG GCAACCTGTT CACCAGCTAT
CGCAATCAGA CGCCTCTGGT GGTCACCGCC GGGCAGCAAT CACGGTCCAT TCTGCCTTAC
GAACCGTTCC TGTTCGCCGA ACGGGCGACG GAGTTTCCCC GGCCCTATGT AAAGTGGAGC
TGTGAGCCCG CCCGCGCCGA AGACGTCCCT GCTGCCATCG CGCGCGCTTA TTATGTGGCC
ATGCAGCCGC CTTATGGTCC GACTTTCGTT TCGATTCCGG TCGATGACTG GGACCGCCCC
TGTCCGCCCC TGGCCACGCG GGATGTCCAT GCGCGCTATG CGGGCGACCC TGCGGTCCTT
GCCGAGGCTG CCCGTGCGAT GGCAGCAGCC AAAAAGCCCA CGATCGTTGT GAACGGTGGT
GTGGCGCGTG ACGGCGCATG GGATGGTGTG ATCACCCTGG CCGAGCGCCA CCAGGCGCCT
GTATGGGTCG CCCCTCTCTG CGGTCGCAAC AATTTTCCAG AGGACCATCC GCTGTTCGCG
GGCTTCCTGC CCGGCGACCG CGCGGCAATC GTCGCCCGCC TTGGTGAGAC CGACTTCATT
CTCACGCTGG GCGGGCCACT TTCCACCTAC CATGTCGATG GAGAGGGCCC GCATATTCCT
GAAGGCGCTC ATATGATCCA GCTGGTCAAT GACCCGGTCG CGGCAAGCTG GGCGCCGGTC
GGCACGTCGA TCGTCACCGA CACCGCTGTC GGGGTCGCGG CGTTGCTGGC GGGACCGGAA
CCAGCCGCGC GATCCGCGCC GCCGCGTCGC CCGGCGCCGC CGGCGCTCGA TATGGGCGGC
GCATTTACCG ACGCCCATCT GATGGAGCGG CTGGCCGCCT TGCGCCCGGC GGGAAGCGTG
ATCGTGGAAG AGGCGCCCGG TTCGCGCGGA GCGATGCAGG CGCGCCTGCC GATCATCGAT
CGCGACACCT TCTACACCGG GGCCAGCGGG GGGCTGGGCT ATGGCTTGCC GGCGGCGGTC
GGCATGGCGA TGGGGCGTCC GGGCGAAAAG ATCATCGCGC TGATCGGCGA CGGCTCCAGT
TCCTATTCGA TCCAGGCGCT GTGGACGGCG GCGCAGCAGA AGCTGCCGAT CAGCTTCGTC
ATCGTCAAGA ACCGGCGGTA CGAGGCGCTG CATCATTTCG GCCGTCATTT CGGGCTGGAC
CGCACCGTCG GTACGGAATT GCCCGACATC GATTTCTGCG CGCTCGCACG AGGCTACGGC
GTCGAAAGCT TCGCCGCTGG GTCGCTTGAG GATATCGACG GAGCACTGCT CGCCAGCTTT
GCGGCAAAAG GGCCGACGCT TGTCGAAGTC TCGGTCGCCT GA
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| Protein sequence | MTSSLIQNTA STPAASTVRD VTLDLMRSLG MTTIFGNPGS TELPMYRDFP DDFRYVLALQ
ESVVLGVADG YALATGNAAF INLHSAAGLG HALGNLFTSY RNQTPLVVTA GQQSRSILPY
EPFLFAERAT EFPRPYVKWS CEPARAEDVP AAIARAYYVA MQPPYGPTFV SIPVDDWDRP
CPPLATRDVH ARYAGDPAVL AEAARAMAAA KKPTIVVNGG VARDGAWDGV ITLAERHQAP
VWVAPLCGRN NFPEDHPLFA GFLPGDRAAI VARLGETDFI LTLGGPLSTY HVDGEGPHIP
EGAHMIQLVN DPVAASWAPV GTSIVTDTAV GVAALLAGPE PAARSAPPRR PAPPALDMGG
AFTDAHLMER LAALRPAGSV IVEEAPGSRG AMQARLPIID RDTFYTGASG GLGYGLPAAV
GMAMGRPGEK IIALIGDGSS SYSIQALWTA AQQKLPISFV IVKNRRYEAL HHFGRHFGLD
RTVGTELPDI DFCALARGYG VESFAAGSLE DIDGALLASF AAKGPTLVEV SVA
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