Gene Swit_5046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5046 
Symbol 
ID5195941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp159796 
End bp161235 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content65% 
IMG OID640579478 
Productaldehyde dehydrogenase 
Protein accessionYP_001260426 
Protein GI148550996 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.0408609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG AAACCCTGAT AAAGCCGACC GGCAGCCTGG CGGCCACATT CGATCGGGCC 
AGCCCGCTTA CCGGCCAGAC AGTGAGCCAG GGCTGCGCGA TGACGGTTGC CGACGCGACC
GCGGCCTGCG ACCGCGCGAG CGCCGCGCAG CCCGCATGGG CCGCGCTGGG ACCGAACGCG
CGCCGCAATA TTCTCATGCG CGCGGCAGAC CTGCTGGCCG AGCGCGGGCC AAGCATCATG
GAGACGGAGA CCAGCGAGGT CGGCGCGGGT GCGCCCTGGG CCAATTTCGA TATTGCCCAC
GGTTGTGGCA CTCTGCGCGA GGCGGCGGCG ATGACGACTC AGGTCGGCGG GGAAACGATT
CCGTCTGACA AGCCTGGCAT GTTGGCGATG ACGATCAGGA CGCCGGTCGG CGTGGTTCTG
GGCTTCGCGC CCTGGAACGC GCCGATCATC CTGGGCGTTA GGTCCTTCGC CATGGCGCTT
GCTTGTGGCA ACGCCGTGAT CGTCAAGGCT TCGGAGCTCT GCCCGCGCAC GCATGAAATG
CTGATCGAAA CCATGCACGA GGCTGGTGTG CCGGAGGATG TCCTGATCCT CGTCAACAAC
GCGCCAGCCG ATGCGCCCGA TGTTGTCGGC GCGCTGATCG CGCATCCCGC CATTCGCCGG
GTCAATTTCA CCGGATCGAC GCGAACCGGA AAGATCATCG CCAAACTCTG CGCCGAGCAG
ATGAAGCCGG TGCTGCTGGA ACTGGGCGGC AAATCGCCAC TCATCATCCT GGACGATGCC
GATCTGGACG AAGCCGCCTC TGCGGCGACA TTTGGTGCGT ACATGAATTC GGGACAAGTC
TGCATGGCGA CCGAGCGGGT GGTCGTTGAC GAGTCGATCG CCGACGCCTT TGTCGACAAG
TTCAAGGCGC GGATCGCGGG CCTCACGGCT GCCGATCCAC GCGGCGGTCC CGTCGCGCTG
GGCTCGCTCG TCGATCCGTC CGCGACGACC ACCGTGTCAC GCATTGTCGC GGATGCGACC
GCCAAAGGTG CCGTCCTGCA CGAGGTCGCC CCCGCGCAAG GCAACTATCT TTCCGCCGCC
TTCGTCGATC GCGTAACGCC GGACATGGCG ATCTATCACG AGGAATGCTT CGGGCCGGTC
ACGACAATTG TCCGCGTGAA GGGCGAAGCG GAGGCGCTGC GCGTCGCCAA CGATACCGAA
TATGGTCTGT CCGCCGCCAT TTACACGCGC GACATCGGAC GGGGGCTGCG CCTGGCGGCG
CAGGTCCAGA GCGGCATCTG TCACATCAAC GGCCCGACCA TTCACGACGA GGCCCAATTC
CCCTTCGGCG GCATGAAGTC CTCTGGCTAC GGCCGGTTTG GCGGCAAGGC GGGGATTGCC
GAATTCACCG AGCTACGGCT CATCACAATC GGACTCGAGC CAGGGCAATA CCCTTTCTGA
 
Protein sequence
MNTETLIKPT GSLAATFDRA SPLTGQTVSQ GCAMTVADAT AACDRASAAQ PAWAALGPNA 
RRNILMRAAD LLAERGPSIM ETETSEVGAG APWANFDIAH GCGTLREAAA MTTQVGGETI
PSDKPGMLAM TIRTPVGVVL GFAPWNAPII LGVRSFAMAL ACGNAVIVKA SELCPRTHEM
LIETMHEAGV PEDVLILVNN APADAPDVVG ALIAHPAIRR VNFTGSTRTG KIIAKLCAEQ
MKPVLLELGG KSPLIILDDA DLDEAASAAT FGAYMNSGQV CMATERVVVD ESIADAFVDK
FKARIAGLTA ADPRGGPVAL GSLVDPSATT TVSRIVADAT AKGAVLHEVA PAQGNYLSAA
FVDRVTPDMA IYHEECFGPV TTIVRVKGEA EALRVANDTE YGLSAAIYTR DIGRGLRLAA
QVQSGICHIN GPTIHDEAQF PFGGMKSSGY GRFGGKAGIA EFTELRLITI GLEPGQYPF