Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5034 |
Symbol | |
ID | 5195919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 147749 |
End bp | 148486 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579466 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001260414 |
Protein GI | 148550984 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 0.246074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.671643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAAAAA AACCAACCCT GATCCTGCTG CCCGGATCGC TGTGCGACGC GACAATGTGG CGCGCGCAGG TCGATGCGCT GGAGGATATC TGCGTTCCGC TGGTTGTCGA TCTGGGGGGT TTTGACACCA TAGCCGCCAT GGCGGATCAT GTCCTTGAAT ACGCTCCGGA CCACAGCTTC GCTCTGGCGG GCTTTTCGCT TGGAGGCTTC GCGGCACTCG AGGTGGTGCG GCGAGCGCCC GACAGGGTCG CCCGGCTGAC TCTGCTCGGC ACCTCGGCCC GGCCTGACAA ACCTGAAAAC GCGCCGCGCC GGCTGGCGAA TATCGCGGCT TTCGAGGAAG ATGCCGATCC ACCCCTGCGC GCCTTCGCCG ATCTGACGCG CGGCTCCACC ACGCCGGAGG GCGTGTCCGC CGCTGTGATC GCTTCGATGC GGCACCATGG TCCGGCCAGC TATGGCCCCC ACCAGCGGGC GATGATGACG CGTCCCGATG CGCGACCGCA TCTGTCCGAC ATTGCGTGCC CGACACTGGT GCTGTGCGGC GGCGAGGATC GGGCCACGCC GCCGGAGGGC AATCGCGAGA TTGCCGAAAC CATTCCCGGC GCAACCTATG TCGAACTGGC CGAAGTGGGC CACATGGTGA CGCTGGAGGC CCCTGACGCC GTCAGCGCCG CCATGCGGAA CTGGCTGCTT TTCCCCGAAG CGTCGACCAT CCACGGAGGC CCAGGAAGCC ATGAATAA
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Protein sequence | MVKKPTLILL PGSLCDATMW RAQVDALEDI CVPLVVDLGG FDTIAAMADH VLEYAPDHSF ALAGFSLGGF AALEVVRRAP DRVARLTLLG TSARPDKPEN APRRLANIAA FEEDADPPLR AFADLTRGST TPEGVSAAVI ASMRHHGPAS YGPHQRAMMT RPDARPHLSD IACPTLVLCG GEDRATPPEG NREIAETIPG ATYVELAEVG HMVTLEAPDA VSAAMRNWLL FPEASTIHGG PGSHE
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