| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5033 |
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| Symbol | |
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| ID | 5195904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 146868 |
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| End bp | 147692 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579465 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001260413 |
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| Protein GI | 148550983 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 0.125191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.667322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGA GCAGCGGCGC GCTGGCGTCT GGCGGAATCG CCGATCCGTC GGTTCTTTTC
GACGTGAGGG GCAAAATAGC GATCATCACT GGGGCATCGG GCGCCTTTGG GGCGCTGGCT
GCCCGCGTAC TCGCTGCCGC AGGAGCCCAT CTTGTCCTGT CTGGTGGCAA TGCCGATGCA
TTGCGTTTGG TCGCGGATGA CTGCGCGAAC GCCGGTGCGT CTGTTGAGAC CATCGTCCGT
CGACCGGAGG AGGAGGCGGA CGCAGCAGCG ATACTCGAAG CCGCGGTCGC GCGTTTCGGA
CGCGCCGACA TTCTGGTCGT CGCTTCCGGG ATGAATGACG TGGCGAAGAT CGAAGACATG
ACGTTCGCCC GTTTCGACGC CGTGATGCAG GCGAATGTCG CCGGACCCTG GCTGATGGCG
CAGGCGATGA CCCGCCAACT GGTCGCTCAG GGGGACGGGG GCAAGATCGT GCTCATGTCG
TCGGCGCGCG GCAAATTGGG GCATCCGGCG GGATACACCG CTTATTGCGC CTCGAAATCG
GCCATCGACG GGATCGTGCG CGCGCTGGGA TGCGAGCTTG GCGGGCATGG AATTACGGTG
AATGCGATAG CTCCGACGGT GTTTCGTTCG GACCTGACGG CATGGATGTT TGAAGACAGC
GAACGGGCGG TGACAACACG CGCCAATCTG CTGCCGCGCA TCCCCCTCGG TCGTCTGGGC
GAGCCGGACG ATCTCGCCGG TCCTTTGCTG TTTCTCTGTT CGCGCGCTTC CAACTTCTAC
ACCGGGCACG TCCTTTATGC CGATGGCGGC TACACTGCGG GCTAA
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| Protein sequence | MTLSSGALAS GGIADPSVLF DVRGKIAIIT GASGAFGALA ARVLAAAGAH LVLSGGNADA
LRLVADDCAN AGASVETIVR RPEEEADAAA ILEAAVARFG RADILVVASG MNDVAKIEDM
TFARFDAVMQ ANVAGPWLMA QAMTRQLVAQ GDGGKIVLMS SARGKLGHPA GYTAYCASKS
AIDGIVRALG CELGGHGITV NAIAPTVFRS DLTAWMFEDS ERAVTTRANL LPRIPLGRLG
EPDDLAGPLL FLCSRASNFY TGHVLYADGG YTAG
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