| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5026 |
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| Symbol | |
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| ID | 5196052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 140067 |
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| End bp | 142451 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640579458 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001260406 |
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| Protein GI | 148550976 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT GTCTTAAGAC ATCGGTGTCG TTGAGCGTCA TGATGATTGC GTCTCCCGTA
TGGGCGCAGG CCTCCCAGGA TGCCAAGACG CCCGCATCGA CCGTCGTCGA CTCAACGCAG
CCGCAGGAAA CGACCGTGGC GGGCCTCCAG GACATCATCG TCACCGCCCA GCGCCGTAGC
GAAAATCTCC AGAATGCAGC GATAGCCGTG ACCGCCGTGT CCTCGGACCA GTTGATCCGA
TCGGGGGTAA CCGACGCGAC CAAACTTACC GCCGTCGCGC CGTCGCTTCA GGTAGGAACA
GTCACGGGCG CCTATAACTC GTTTTACCTG CGGGGCGTCG GTAACTTTGC CACCACAGCT
CTCAACGATG CTGCGATCGC CTTCAGCGTC GACGGCGTAT TTATCGCGCG TCCTTCGTCC
AGCACGGGGG TCTTCTACGA TCTCGAGCGG ATCGAAGTCC TCAAGGGGCC GCAGGGAACC
CTTTACGGGC GCAACGCCAC TGGCGGCGCG ATCAACATCA TTACCGCCAA GCCTAAGCTG
GGCGAGTTTG GTGGTTACCT GATCGGCGAG TACGGCAATT ACGATCGACG CCAGCTGCAG
GCGGCCATCA ACGTGCCGGT CGGTAACGAC GGGGCCGTGC GGGTGGCGGG GCAGGTCACG
CGGCGCGACG GATTCTATTC GGATGGCACG GGTGACGAGC GCAGCGAAGC CGGACGCATG
CAGATCGCGC TTCGGTCATC GCAATCGTTG CGCCTGCGCG TCTCGTTCGA TTACTCGCAT
CAAGGTGGCC TTGGGCCGGG GGGCACGTAC CCCGATCTCA TCAACAAGGA CCGCCAGATC
GGGTTCCTCG ATCCACGCGC AGGCGCCATC GCCGCCTCTA CGTTCATCGG GTTTGCCGGG
AACTTCTTGA AGCCGCTGAC GACCAGGCCA TATTTCAACA ACCGATATTA CGGCGCAAGC
GTACAGGCCG ACCTTGATAC CAGCATCGGC ACACTGACCT TCCTGCCGGC CTATCGACGC
AGCGAGCTTG ACCTGCTCTC GATTGCGTCG GGCCTCGTCA ATACCCAGCA GGAGAAGGAC
GATCAGGTCT CGGGCGAATT GCGGCTGGCA TCGCCCGATC GGGGACTGAT CCGCTATCTC
GTCGGAATAT ACGGCATCCA CGAAGACATC CGATCCAAGT ACCTGTTCAA TGAGCAATAT
TTCGGCGCCA ACGGCACCAA CAACGCCAAT ACCGACAGTA TAGCGGCGTT CGGCCGGCTC
ACGTTTGCCC TGACGGATCG TTTTCGTATC AACGCCGGTG CACGCTATAC CGTAGATCGC
AAATCGGTGA TGACCGATTC GTATCAAGCG AACGTATTAT GCTTCTCGCC AAATCATCTC
TGCATCGGCG GACCATCACT GCCGGAAGAC TATGGCGCGT TCGAGCAGTT CGCCAGTGCC
CGTCCAGCCT TTCCGACGCC GTTCGGAACG ACGGGCAACT TCGTGTCCAT CACCCACCCG
ATCGTCAATG CCGAACGGAC CTTCAAGAAG CTGACCTGGC GCGGCGGCGT GGAATTCGAC
GCAGGGCAGC GCTCGCTGAT TTATGCGACC GTGGAGACCG GCTTCAAGGC GGGCGGTTTC
TTTTCGAGCA TAGACGATCC TACCTATCAA CCGGAGACGA TCACCGCATA CACGGTGGGA
TCGAAGAACC GATTTCTCGA CAATCGACTC CAGCTGAACC TTGAGGCGTT CTACTGGGAC
TATCGGAACC AGCAGGTGTC GACGTTCCGA ACCAATTCAA TTGGCGGGAC GGAGTTCGTC
ACGCAGAACG TGGGCAAGGC CCGTTTTTAT GGACTGGAGG CGGATGCGAA CATCCTTGCA
ACGCCGACGA CGTTGCTGAC GGTCAATGCG CAGTATCTGA ATGCGCGCAA CACGTCGTTC
GTCTATACTT CCGCCAATCA AAGCCCGCCC GGGTCGCCGC CCTCCCCGCC AGCGACGGGC
TGCCCGGCGA CGCTGTCGAC GGATGTTCGC ACGTATACGG TCAACTGCAG CGGCTTCACA
CCAGCGCAGG CGCCCAAGTG GCTCATCACG CTGGGCGCGC AGCAAACAGT GGAACTCGGT
AGCGCCGGAA AGCTGGTGTT CAACGCCCAG GCACGACACC AGAGCCGCAC CTTCACGGGA
TCGGAACTGC TGAATTCAGA GATCCAGCGT GCTTACTGGA TAGGGGATGG TGAAATCAGC
TATCATCCGG TCGGAGACCG TTTCACGATC GCCGCCTATG TGAACAACGT GACGAACAAG
CAGATCGTCG CACAATCGAT CCCGTTCCCG ATCTACTTTC CCTTGGTCGC CCAGACACTG
CGACCGCCGC GCACGTATGG CGTGCGCGCC CAGGTCAAGT TTTGA
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| Protein sequence | MKACLKTSVS LSVMMIASPV WAQASQDAKT PASTVVDSTQ PQETTVAGLQ DIIVTAQRRS
ENLQNAAIAV TAVSSDQLIR SGVTDATKLT AVAPSLQVGT VTGAYNSFYL RGVGNFATTA
LNDAAIAFSV DGVFIARPSS STGVFYDLER IEVLKGPQGT LYGRNATGGA INIITAKPKL
GEFGGYLIGE YGNYDRRQLQ AAINVPVGND GAVRVAGQVT RRDGFYSDGT GDERSEAGRM
QIALRSSQSL RLRVSFDYSH QGGLGPGGTY PDLINKDRQI GFLDPRAGAI AASTFIGFAG
NFLKPLTTRP YFNNRYYGAS VQADLDTSIG TLTFLPAYRR SELDLLSIAS GLVNTQQEKD
DQVSGELRLA SPDRGLIRYL VGIYGIHEDI RSKYLFNEQY FGANGTNNAN TDSIAAFGRL
TFALTDRFRI NAGARYTVDR KSVMTDSYQA NVLCFSPNHL CIGGPSLPED YGAFEQFASA
RPAFPTPFGT TGNFVSITHP IVNAERTFKK LTWRGGVEFD AGQRSLIYAT VETGFKAGGF
FSSIDDPTYQ PETITAYTVG SKNRFLDNRL QLNLEAFYWD YRNQQVSTFR TNSIGGTEFV
TQNVGKARFY GLEADANILA TPTTLLTVNA QYLNARNTSF VYTSANQSPP GSPPSPPATG
CPATLSTDVR TYTVNCSGFT PAQAPKWLIT LGAQQTVELG SAGKLVFNAQ ARHQSRTFTG
SELLNSEIQR AYWIGDGEIS YHPVGDRFTI AAYVNNVTNK QIVAQSIPFP IYFPLVAQTL
RPPRTYGVRA QVKF
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