| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5024 |
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| Symbol | |
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| ID | 5196049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 139135 |
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| End bp | 139704 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640579456 |
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| Product | dehydrogenase |
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| Protein accession | YP_001260404 |
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| Protein GI | 148550974 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 69 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCGAACCG ACGGGGTCGC GGTCGAGACC TTTGGACGCA TCGATATATT GATCAACAAT
GTCGGCGGCG CGATCCGCAT GCGTCCCTAT GCTGCGTTCA CGCCTAAACA GATCGATGCG
GAAATCCGCC GCTCGCTGAT GCCGACGCTA TATTGCTGCC ATGCAGTCCT GCCTACCATG
CTGAAGCAGG GCGTCGGGAC GATCGTCAAC CTCTCATCCA ACGCCACGCG TGGTATCCGG
CGAGTGCCCT ATTCGGCGGC GAAGGGCGGC ATTAACGGCC TGACGCAGGC GCTGGCGATG
GAATATGCGC AGGATGGCAT CCGGGTCGTT GCCACCGCAC CGGGCGGCAC ACAAGCTCCG
TCGCGAAGGG TTCCTCGCAA TCCTGACGGC GACAATCAAC AGGAACAGGC GTGGATGGCG
GAAGCCGTAG GTCAGGTGAC GTCTTCTGCG TTCATGAAAC GCTATGGCAC GCTTGACGAG
CAGATCGCGC CCATTCTGTT CCTCGCGTCG GACGAGGCAA GCTATATTAC CGGATCGATT
CTGCCCGTCG CGGGCGGGGA TTTAGGCTGA
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| Protein sequence | MRTDGVAVET FGRIDILINN VGGAIRMRPY AAFTPKQIDA EIRRSLMPTL YCCHAVLPTM
LKQGVGTIVN LSSNATRGIR RVPYSAAKGG INGLTQALAM EYAQDGIRVV ATAPGGTQAP
SRRVPRNPDG DNQQEQAWMA EAVGQVTSSA FMKRYGTLDE QIAPILFLAS DEASYITGSI
LPVAGGDLG
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