| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5019 |
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| Symbol | |
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| ID | 5196073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 135736 |
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| End bp | 136938 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640579452 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001260400 |
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| Protein GI | 148550970 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.582505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAG CCTTCATCTG CGATGCTATT CGCACCCCGA TCGGCAAGCT CAACGGATCG
CTTGCAACCG TGCGCGCCGA CGATCTTGCT GCGCTGCCGA TCAAGGCGTT GATGGATCGC
AACCCTGATA CCGACTGGTC GACGCTGGAC GATGTGATCC TGGGCTGCGC CAATCAGGCC
GGTGAAGATA ATCGCAATGT CGCGCGTATG GCCGTGCTGC TGGCAGGTTT GCCAGAGTGC
GTTCCGGGCG TGACTGTAAA CCGTCTGTGC AGCTCCGGGC TCAATGCGCT TGGTATCGCG
TCACAGGCGA TCCGTAGCGG AGACGCAGAT TTCATGATCG CGGGCGGCGT GGAGAGCATG
ACGCGGGCGC CATATGTGCT GGGAAAGGCG GGCAGCGCCT TCGGTCGTGA CCAGAAGATC
GAGGATACGA CGCTGGGCTG GCGGTTCGTC AATCCGGCGA TGCAGGCAGC ATACGGCGTA
GATACCATGC CGCAGACCGG CGAAAATGTC GCGCAGGAGT GGGGTGTCAG CCGCGAAGCG
CAGGACCGCT TCGCGCTCGC CAGTCAGGAG AAAGCGGCAC GTGCACAGGC GGGCGGGCGC
TTTGCCGCTG AGATCATTCC GGTATCGGTG CCGCAGCATA GGGGCGATCA TGTGCTGTTC
GAAGCCGACG AGCATCTGCG TGCAACCAGC CTTGATATTC TGGCAAAGCT GAAGCCTGTT
ACAGGTCCAG GCGGGACGGT AACGGCCGGT AATGCGTCGG GCCTTAATGA CGGGGCCGCC
GCGATGCTCG TGGCGACGGA AGCCACGGCA GCGGCGCAGG GACTGGTCAC TCGGGCGCGC
GTGGTCGGCA TGGCCGCCAG CGGGATAGCG CCGCGGATCA TGGGCGCTGG CCCGATCGAA
GCGGCGCGGC GTGTGATGGC ACGCCATAGT ATCACGACGG ACGCATTGGA CGTGATCGAA
CTCAATGAAG CCTTTGCAAG CCAGGCCATA GCCACATTGT CGTCGCTGGG CATCGACCCC
TTGGATCCGC GCGTCAACCC CAATGGCGGT GCCATCGCTC TTGGTCATCC GCTCGGCATG
TCAGGAGCAC GTATCGCGTT ATCGGCTGTC GAAGAGTTGC ATCGAGTTCA GGGGCGTTAC
GCCCTGGCGT TTATGTGCGT GGGCGTTGGT CAGGGTGTGG CTGTTTTACT GGAGCGCGCA
TGA
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| Protein sequence | MAQAFICDAI RTPIGKLNGS LATVRADDLA ALPIKALMDR NPDTDWSTLD DVILGCANQA
GEDNRNVARM AVLLAGLPEC VPGVTVNRLC SSGLNALGIA SQAIRSGDAD FMIAGGVESM
TRAPYVLGKA GSAFGRDQKI EDTTLGWRFV NPAMQAAYGV DTMPQTGENV AQEWGVSREA
QDRFALASQE KAARAQAGGR FAAEIIPVSV PQHRGDHVLF EADEHLRATS LDILAKLKPV
TGPGGTVTAG NASGLNDGAA AMLVATEATA AAQGLVTRAR VVGMAASGIA PRIMGAGPIE
AARRVMARHS ITTDALDVIE LNEAFASQAI ATLSSLGIDP LDPRVNPNGG AIALGHPLGM
SGARIALSAV EELHRVQGRY ALAFMCVGVG QGVAVLLERA
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