| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5018 |
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| Symbol | |
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| ID | 5196088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 134767 |
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| End bp | 135651 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579451 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001260399 |
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| Protein GI | 148550969 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.448472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCATT GGGATGATCT TCGCCTGTTT CTGGCCGTCG CACGCGCTGG CCGCCTCACC
AAGGCGGGGC AGGCCCTGGG CATCAATCAC ACCACCGTCG CCCGCCGCCT GACCGCGCTG
GAGGAAGCAC TGGGCGCGCA TTTGTTCGAC CGCACCTCGC GCGGGGTGGC TATGACTGCG
GCAGGCACGC TGTTGCTCGA TCATGCCGAA CGCGCCGAAC GGGAATTTGA GGCAGCGGCA
GCGGCGCTGT CCGGCCGGGC CGAAGCGATC GCGGGGGAAG TCCGCCTCGC CACGCCCGAA
GCCTTCGGCA CCTATATCGT CGCGCCTAAC ATCGTGGATT TTCACGCCCG CTATCCAGGC
CTGTTGCTGG AGCTGATGCC CGAGTCCCGC GCCGTCAGTC TCGCCAACCG AGAGGCCGAC
ATCGCCATCA CCGTCGATCG ACCGCCACGG GGCAAGCTGG TGGTGCGCAA ATTGTGCGAT
TATCGGCTCG GCCTTTACGC TTCGGCTGAT TATCTCGCCT GCCACCCGCC TATTCGCAAC
GCGCAGGACG TCGCTGCGCA GCCCTTTGTC GGCTATATCG ACCAGATGAT CGACATGCAC
GGCCTGCGCT ACCTGTCCGA AGTCGCGGAC GAGACACGCC CCGTATTCCG CTCCAGTTCG
ATCGTCGCGC AGCAGAAGGC GGTGGCGTCC GGCGTAGGCC TGGGCTTGCT CCACCGCTTT
TCCGCTGACA GCGAACCGGG CCTTGTCCGC ATCCTGCCTG AGCAAGTGGA AATCACGCGC
AGCTACTGGC TCGTCCTTCG CCCCGAGCAC CAGAAGTCGC CTCGGACCCG CGCCGTCATC
GACTTTATCG ACGACCTGCT GGCCAGATAC CGCACGCGCC TTTGA
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| Protein sequence | MLHWDDLRLF LAVARAGRLT KAGQALGINH TTVARRLTAL EEALGAHLFD RTSRGVAMTA
AGTLLLDHAE RAEREFEAAA AALSGRAEAI AGEVRLATPE AFGTYIVAPN IVDFHARYPG
LLLELMPESR AVSLANREAD IAITVDRPPR GKLVVRKLCD YRLGLYASAD YLACHPPIRN
AQDVAAQPFV GYIDQMIDMH GLRYLSEVAD ETRPVFRSSS IVAQQKAVAS GVGLGLLHRF
SADSEPGLVR ILPEQVEITR SYWLVLRPEH QKSPRTRAVI DFIDDLLARY RTRL
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