Gene Swit_5016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5016 
Symbol 
ID5195967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp132599 
End bp132973 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID640579449 
Producthypothetical protein 
Protein accessionYP_001260397 
Protein GI148550967 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0903137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA GCCGCTTTGT TGTGAGTGAT GGGATGTGGT CTCGGCTTGA GGGGATATTT 
CCCGGCAAGG CGGTAGACCG GGGTGTGACG GCGGCTGATA CCCGCTTGTT TCTGGAAGCG
GTGTTCTGGC GGGTCCGCAC GGGTTCACCT TGGCGCGACC TGCCAACCGG GTTCGGTAAT
TGGAACAGTG TTTTCAGACG GTTCCGGCGT TGGGCGCGCG ACGGGGTGTT TGACCGGCTT
TTCGAGGCAG TTTCGGGCGA TCCCGACATG GAATATGCCC TGATCGATGG CACGGTTGGT
TCCGTTCACC AGAAGGCGAC CGGCGCTAAA GGGGCACTCA AAATCAGGCC ATCGGGCGCT
CGAAAGGCGG ACTGA
 
Protein sequence
MDASRFVVSD GMWSRLEGIF PGKAVDRGVT AADTRLFLEA VFWRVRTGSP WRDLPTGFGN 
WNSVFRRFRR WARDGVFDRL FEAVSGDPDM EYALIDGTVG SVHQKATGAK GALKIRPSGA
RKAD