| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5001 |
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| Symbol | |
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| ID | 5195877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 118324 |
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| End bp | 119328 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579436 |
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| Product | P-type DNA transfer ATPase VirB11 |
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| Protein accession | YP_001260384 |
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| Protein GI | 148550954 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 0.547731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA CCGCCGTCCT GCGCCATTAT CTCGCGCCGA TCCTGCCGCT GCTGGAGCCG
GTCGAGGTGA CGGAGCTTGT CATCAACAAG CCCGGCGAAG TCGGCATCGA AGATCATCGC
GGTTGGCATT GGCATAACGT CGCCGAACTC GACAGCGACT GGCTCGCGAC GCTGGCCGTC
GCCGCCGCGA GCTTCACCCG GCAGGACGTC AATGCCGAGA CCCCGATCTG CTCGACCATT
TTGCCAGGCG GCGAGCGCTG CCAGATCGTC ATACCCTCGG TAACCCCGAC CGGCGCGCCA
TCCTTCACGG TGCGCAAGCC TTCGCGCGTC AATCTCGCGA TCGATCAACT CGCGCAAACA
GGTTTGTTCG CTGGCACACG CTCGGCCTCC CACGGTCTCG GCGAGGTCGA TGCCCAGCTG
GTGGCGCAGC GCGATGCCGC TGACTGGCCG GCGTTCTTCA AGACCGCCGT TGCCGCCCGT
AAGAACATCC TGGTGAGCGG CGCGACCGGC TCGGGCAAGA CCACCTTCGC CAAGGCGCTG
ATCCAACTGA TCCCGCCCGA GGAACGGCTG CTGACGATCG AGGATACGCG CGAGCTCGTC
GTCGAGCATC GCAACGTCGT GCACATGGTC TATTCGAGCG AGCGACAGGG GCTGGCGAAG
GTCGGCCCCA AGCAGCTGCT CGAAAGTGCG CTGCGCATGC GGCCCGATCG CATCCTCCTG
CAGGAGCTGC GCGACGGCAC CGCCTTCTTT TATCTGCGCA ACGTCAACTC GGGGCACCCG
GGTTCGATCA CAACCGTCCA TGCCGGCTCG GCGTTGGGCG CGTTCGAGCA GCTGACGTTG
CTGGTCAAGG AATCCGAAGG CGGGCGCGAT CTGGCCCGCG ACGACATCCG CGGGCTGTTG
CACATGCTCG TCGACGTGGT CGTCCAGACG CGCAAGCGCG CCGGAAAATT CGAAGTCGAG
GAGGTGTATT TTGACCCGCC TGTCGGACGC ACGACCGCTC ACTAG
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| Protein sequence | MSDTAVLRHY LAPILPLLEP VEVTELVINK PGEVGIEDHR GWHWHNVAEL DSDWLATLAV
AAASFTRQDV NAETPICSTI LPGGERCQIV IPSVTPTGAP SFTVRKPSRV NLAIDQLAQT
GLFAGTRSAS HGLGEVDAQL VAQRDAADWP AFFKTAVAAR KNILVSGATG SGKTTFAKAL
IQLIPPEERL LTIEDTRELV VEHRNVVHMV YSSERQGLAK VGPKQLLESA LRMRPDRILL
QELRDGTAFF YLRNVNSGHP GSITTVHAGS ALGAFEQLTL LVKESEGGRD LARDDIRGLL
HMLVDVVVQT RKRAGKFEVE EVYFDPPVGR TTAH
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