Gene Swit_4999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4999 
Symbol 
ID5195945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp115400 
End bp116365 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID640579434 
Producthypothetical protein 
Protein accessionYP_001260382 
Protein GI148550952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CAGAGAATGA TCGCAAGCAA TCCGGGACGG CGAGGGCTAT TACCAACAGC 
GTTGGCCTCG ACGACGCCAG ACAGCGCAAG GCGCAGCCGC CAGGGGCGGC TGCGCTAGAA
AAGTCCTCGC CCGGGGGACC AAAGGACGGG CCCACCGAAG CACCTGGTGA TGTCGGCGCT
GTCGGTGCGT CACGAAGTGC GCCCAAGGTG CATTCCCTCA AGGCGGGCGA CGTTCCGGAG
AGCGTGCGGA AGCGCTATTA TGCCGACAAG GCGAAATGGT CGGGCGAACC TGCCTTTTTC
ACGACGGCGC AAGCAAAGGA TCCCGCGTTT CGCGATCAGG GCCGACGTCT GGTCACGGCG
ACGGAGAGCC AGGAAGTCGT CAAGGATTTG GTGGCGATCG CACAACACCG CAATTGGGAT
CGGATTCACG TCACGGGATC GGAAGAATTT CGGCGATCGG TCTGGATCGA GGCCAGCCAA
AAGGGGCTGG AGGTACGTGG CTACAAGCCC AACGATCGCG ACCTCCAGGA ACTCGACCGG
CGGCGCGGGG AAACGAGCCG CAATACGATT GCGCCCATGG CAGCCCGCGA CGTCGATGTC
GTCCGTGGTT CAACTGGGAT GGGCCGCGAG AGCGACGCCA GTGGTTTGGA GCGGCCGGGT
GCGCGGCGCG GCGATCGTGG CACCACGCCG AATGATCGCG CGGCCGACAG CCAGATGCGC
GTGATGGAAG CGGTGATCCG ACGGACGTTG TTCGACAATC CCGAGGCGGT TGCGCGGGTG
ATGACAGTCG CCCGCACACA GCTCGATGCG CATATCGCGG CGGGAAGGAA CATCCGACCG
GCAATGGTCA AGGATACCGC CCCCAGCGTC AGGCAGGATG TGGTCCGCGG CCGTGACCCA
GCCACACCCC CCATCCCTCG TCAGGGTCGC GAGCCCAAGC CCCAGGAGCG TAACCGGTCT
CGGTGA
 
Protein sequence
MTMTENDRKQ SGTARAITNS VGLDDARQRK AQPPGAAALE KSSPGGPKDG PTEAPGDVGA 
VGASRSAPKV HSLKAGDVPE SVRKRYYADK AKWSGEPAFF TTAQAKDPAF RDQGRRLVTA
TESQEVVKDL VAIAQHRNWD RIHVTGSEEF RRSVWIEASQ KGLEVRGYKP NDRDLQELDR
RRGETSRNTI APMAARDVDV VRGSTGMGRE SDASGLERPG ARRGDRGTTP NDRAADSQMR
VMEAVIRRTL FDNPEAVARV MTVARTQLDA HIAAGRNIRP AMVKDTAPSV RQDVVRGRDP
ATPPIPRQGR EPKPQERNRS R