| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4982 |
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| Symbol | |
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| ID | 5195960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 94568 |
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| End bp | 95839 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579418 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001260366 |
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| Protein GI | 148550936 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGA TCCATGACCT GCTGGTGCGA GAAGGCTTTG AGGGTTCTTA CGATGCGGTG
CGGCGCTATA CGACGCGCTG GAAGATCGAG CGGCGCAAGG ATGCTGGCGA TGGCGTCACC
GCCTTCATCC CGCTGATGTT CAGGCCAGGC GAGGCCTACC AGTTCGACTG GAGCCATGAG
GATGTCGAGA TCGCAGGAGC GCCGATGCGG GTGAAGGTCG CGCATATGCG CCTGTGCGCG
TCACGTGGGG TCTATGTCCG GGCCTATCCT CGCGAGAGCC AGGAGATGCT GTTCGACGCG
CATGCGCGCG GCTTTGCCTT CTTCGGCGGC GTGCCAGGGC GCGGCATCTA CGATAATATG
AAGACGGCTG TGACGAGCGT GTTCACCGGC AAGGAACGCG TCTTCAACCG GCGGTTCCTG
ATTATGACCG ACCATTATAT GGTCGAGCCC ACGGCCTGCT CGCCTGCGGC GGGATGGGAG
AAGGGTCAGG TCGAGAACCA GGTGCAGACG ATCCGGGGTC GCTTCTTCCA GCCCCGGTTG
CGGTTCGCCA GTCTCGAAGA GCTCAATGGC TGGCTGGAGG CCGAGTGTCG GCGCTGGGCG
GAACGGCAGC CCCATCCTGA ACAGGGCGAG CTGACCGTGG CGCAGGTGCT GGAGATAGAA
CGATCTGCGC TGCAGCCGAT GCTGGGACCG TTCGACGGCT TCAATGAGAG TGAGCATGCC
GTGACCGGCA CCTGCCTGAT CAGCTTCGAC CGCAACCGCT ACTCGGTGCT CTCGACGGTG
GCACGACGCA CGGTGCAGGT CCGCGCCTAT GCCGACCGCA TCGTCGTTCG CTGCGGCGAA
GAGGTTGTCG CTGAACATCC TCGCTACTTT GGGCGCAACC GCACGATCTA TGACCCCTGG
CATTATCTGC CAGTGCTGGC CCGCAAGCCT GGCGCGCTGC GGAACGGTGC CCCCTTCCAG
GACTGGGATC TGCCACCGGC GCTTGCCCGC CTGCGCCGCA AGCTGGGTAA TGGCGACGAT
GCCGATCGCC GGTTCGTCCG TGTGTTGTCG GCCGTACTGA CCGATGGCCT GGAGCCTGTC
GAAGCCGCTG TGCGTGAGGC ACTGGCGACA GGCACGGCAA GCGACGACCT GATCCTCAAC
ATCCTGGCAC GACGCCGGGA ACCGCCGCGT CCGCTGACGA TCATCACCTC CGAGGATAGC
GCCTTGCGCC ATCCCCCGAT CGCCGACTGT GCCCGTTACG ACCAGCTGAG GACCTTCGAT
GCAGCGGCAT GA
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| Protein sequence | MTRIHDLLVR EGFEGSYDAV RRYTTRWKIE RRKDAGDGVT AFIPLMFRPG EAYQFDWSHE
DVEIAGAPMR VKVAHMRLCA SRGVYVRAYP RESQEMLFDA HARGFAFFGG VPGRGIYDNM
KTAVTSVFTG KERVFNRRFL IMTDHYMVEP TACSPAAGWE KGQVENQVQT IRGRFFQPRL
RFASLEELNG WLEAECRRWA ERQPHPEQGE LTVAQVLEIE RSALQPMLGP FDGFNESEHA
VTGTCLISFD RNRYSVLSTV ARRTVQVRAY ADRIVVRCGE EVVAEHPRYF GRNRTIYDPW
HYLPVLARKP GALRNGAPFQ DWDLPPALAR LRRKLGNGDD ADRRFVRVLS AVLTDGLEPV
EAAVREALAT GTASDDLILN ILARRREPPR PLTIITSEDS ALRHPPIADC ARYDQLRTFD
AAA
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