| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4978 |
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| Symbol | |
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| ID | 5196086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 86411 |
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| End bp | 88630 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640579414 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001260362 |
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| Protein GI | 148550932 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 50 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAACT CTCCGCCTTC TCCCTCTGAG GGCGAGGACG CCTATGACCG GTTTCATCCT
GAGATCAGAC GGTGGATCAG AGAGCAGGGC TGGGACCGCC TTCGGGAAGT GCAGCAGAAG
GCGTCTCGCG CGCTCTTTGA CAGCCGAGCG GATTTGCTCA TTTCCGCATC GACCGCTGCG
GGAAAGACCG AAGCGGCATT CCTTCCATTG CTTAGCCAGA TGGCGGGCCG GCAAGAGGCT
GGCGTGGCGA TACTCTACGT CGCCCCCTTA AAGGCGCTCA TAAACGATCA ATATGCCAGG
CTTTCAGAAC TGGGTGAAAG ACTGGAGATG CCCATTGTGC GCTGGCACGG TGACGCTCCG
GCAGGACCCA AAACCGCGAT CCTTCGCAAT CCCAAGGGCG TTGTCCTCAT AACGCCTGAG
TCGATCGAGG CGATGCTGGT CAGGCGGCCT GGCGCGGCTG AAAGCCTCTT CGGCCGGCTT
GACGCCATTA TCATCGATGA ACTTCATGCT TTTCTCCAGG GCGCGCGCGG TCTTCACCTG
TGGAGCTTGC TTAACCGGAT GGAGGCTCTG AGTGAGACAA GGGCACGCAG GGTTGGCCTG
TCTGCAACTC TGGGCGATCT TGCAGAGGCG GCCGAGTGGT TGAGCGGGAC AGCCCGGCAG
CCGCCAAATG TGGTCGTTGT CGAAGGAGCC TCTGCGCCCA TCAAGCTTCA GGTTCGCGCC
TATATTGAAC CGCCAGAATC GACTGATCGG TCAGCTACGG AGCTTCCGGC TGAGTATTCC
GCCCTCAGCC ATATCGCTGC GCATGCGTTC GATGCGCTGC GCGGTCAGAA TAACCTCTTC
TTTGCCGGTT CGCGAGGCAA TGTCGAGGAA TTAGCCGATC GTTTGCGCAC GTTGTCAGAT
GAGCGCTCGG TTCCGAATGA GTTTTTCCCT CATCATGGCA GCCTGTCAAA GGAACTCAGA
GAGGAGCTTG AGGCGCGGTT GAAGCTCGGC CGCCTGCCCA CAACGGCGGT TGCCACTACG
ACACTTGAAT TGGGTATAGA CATAGGCTCC GTCCATGCTG TGGGCCAGCT TGGGGCGCCG
CGCTCGCTTG CCTCGCTTCG CCAGCGCCTT GGCCGGTCAG GCCGGCGCGA AGGGGCATCC
GCCATATTCA GAAATTATGT TCGGGAGCCT TTCCTGGCAG CGGACGCGGA TCCTCTCGAT
CGGCTACATC TGCCAGTCGT TCAGGCCGTC GCTGCGATGA ATCTGCTTCG TGCACGGTTT
GTCGAGCCGC CGCGGCCAAA CGGTGCGCTT CTTTCTGTGC TGCTGCACCA GCTATTATCC
TATATCACTC AGGCGGGCGG CTGCAGTGCA TCCGACCTTT ATACGGCTCT TTGTGGCGCG
GGGCCGTTTT CGGCGGTCAG CAAGCGGGAC TTCGCCAGCT TGCTACATGG GATGGGGCAG
GGGGAGGAGC CGCTGCTTGA ACAGGCGCAG GACCGTACCT TGTTGCTGGG GCCGATGGGC
GAACGGATCG TTGCAGGCCG CGACTTTTAC GCGAATTTCA AGTCCCCCGA AGAATGGCGC
CTTGTCCATC AAGGACGAAC GCTCGGCACG CTGCCGATCA TAAATCTGCT GGCCATAGGT
AGTATCATTG GGTTCGCTGG AAGGCGCTGG CGCGTGATTG CTGTCGACGA CCCGGCCAAG
GTGGTTGAGG TGGCCTCGCA CCGTGCTGGC AAGATACCGA AATTCGATCG TGTTGGTAGT
GAGGCAATTC ATGACCGGCT AGCGTATGAA ATGCGGCTGG TGCTGAGTGA TAGCGCCTTG
CCTGGATATC TCGACCCGGT CGCGCGAGGG TTGCTGCTTG AAGGCAGGCA ATATTATGCC
GATCTGGGCA TGGCTCGTTT CCTTGATGCC GGATCTGTAA CCCATGTCAT GACGTGGCGC
GGGTCGGACG TGAACGGCTT GTTTGCCGTG TTGCTCACCT CGATAGGGTT CGAATGCGAG
ACGTTCGATG TCGGAGTTAC CTTGACCAAT GCTTCCATCA ACCAAGCGCG AGACGTAGTT
GCGGTGCTGG AACAATGCCC GCCGGTCGCC GAGCTAGGAC AATTTGTCAC CAACCTCTCT
GTCGAAAAAT ATGACGAATT GATACCAGAG GCTTTGCATC GCGATTTTTG GGTTCGCCGC
CACGAGCATC TTTCGACAGA AGTATCGTCT TTGCTTCAAG AGTTGCAGCA AGTGGATTGA
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| Protein sequence | MTNSPPSPSE GEDAYDRFHP EIRRWIREQG WDRLREVQQK ASRALFDSRA DLLISASTAA
GKTEAAFLPL LSQMAGRQEA GVAILYVAPL KALINDQYAR LSELGERLEM PIVRWHGDAP
AGPKTAILRN PKGVVLITPE SIEAMLVRRP GAAESLFGRL DAIIIDELHA FLQGARGLHL
WSLLNRMEAL SETRARRVGL SATLGDLAEA AEWLSGTARQ PPNVVVVEGA SAPIKLQVRA
YIEPPESTDR SATELPAEYS ALSHIAAHAF DALRGQNNLF FAGSRGNVEE LADRLRTLSD
ERSVPNEFFP HHGSLSKELR EELEARLKLG RLPTTAVATT TLELGIDIGS VHAVGQLGAP
RSLASLRQRL GRSGRREGAS AIFRNYVREP FLAADADPLD RLHLPVVQAV AAMNLLRARF
VEPPRPNGAL LSVLLHQLLS YITQAGGCSA SDLYTALCGA GPFSAVSKRD FASLLHGMGQ
GEEPLLEQAQ DRTLLLGPMG ERIVAGRDFY ANFKSPEEWR LVHQGRTLGT LPIINLLAIG
SIIGFAGRRW RVIAVDDPAK VVEVASHRAG KIPKFDRVGS EAIHDRLAYE MRLVLSDSAL
PGYLDPVARG LLLEGRQYYA DLGMARFLDA GSVTHVMTWR GSDVNGLFAV LLTSIGFECE
TFDVGVTLTN ASINQARDVV AVLEQCPPVA ELGQFVTNLS VEKYDELIPE ALHRDFWVRR
HEHLSTEVSS LLQELQQVD
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