Gene Swit_4975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4975 
Symbol 
ID5196078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp83302 
End bp84237 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID640579411 
ProductparB-like partition protein 
Protein accessionYP_001260359 
Protein GI148550929 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGT TCGATCAGCG CGCCGAAGAG TTCGGACTGC TCGTCGGTCT CCATGATAGC 
GCGCGGCGCG TCGAGGATTT GCCGCTCGAC TGGATCATGG GCGATCCCGA AAATCCGCGG
CGCGTGTTCG ACGAGACGGA GCTCAAGGAT CTTGCTGCCT CGATCGCCGC GCGCGGCGTC
CTGCAGCCGA TCATCGTCGC CCCGAAAAAT GGCGACGGCC TTCACGTCAT CCGCGTCGGC
GAGCGGCGCT TTCGGGCATC GCGCCTCGTC GGGCGCGAGA CTATCCCGGC GATCGTGATG
GCGGTGGTGA ACCGTGCCGA CACGCTCGCC GATCAGATCG TGGAGAATGA CCAGCGCGCA
GGCCTGACCC CCCATGATCT GGCGAGCGGG ATCGAACGCA TGCTGGGTGC CGGGGTCACC
CAGGCGGAGA TCGCCCGCGC GCTCGGCCGA TCGAAGCAGT TCGTATCGCT ATATGCCGCC
TGTGCCGACA TGGCGCCCTG GCTGCGGGCC GCGATCGACC AGATGCCGAT CCGGTTGCTC
TACGACCTCC ACCGGGCTGC CCGTACTCAT GGCGACGCGG TGCGCGCCTA TGTTGAGCGG
CTTGGTGATG AAAACGTGAC CCTCGCCGAG GGTGGCCGGT TCATCGCGGG ACTTAAGGCA
TCCGAGAATC TGCCGGATGC CCGTCTCCGC GATGTGCCCG CGCTCTCGGA CGGGCAGGGC
GCCGAGCGCG CTGCACCGAG CCGACCGGTT CGTGCCGGTG TCGGCCTGCG TTCGATGTTC
GGCACGGAGG TTTCTTCGCA ACCCCGGCCC CTTGATGCGG TTCGGGTGAC GGTGGACGGG
CGGACAGGAC GTTTGGTCCT TCCCGAGCGG GTCCGGGTGA TGTTCGACGA CGGCGAGGAG
ATCGAGGCGT CCGTTGCGGA CATTGCCGTG GGGTAG
 
Protein sequence
MGKFDQRAEE FGLLVGLHDS ARRVEDLPLD WIMGDPENPR RVFDETELKD LAASIAARGV 
LQPIIVAPKN GDGLHVIRVG ERRFRASRLV GRETIPAIVM AVVNRADTLA DQIVENDQRA
GLTPHDLASG IERMLGAGVT QAEIARALGR SKQFVSLYAA CADMAPWLRA AIDQMPIRLL
YDLHRAARTH GDAVRAYVER LGDENVTLAE GGRFIAGLKA SENLPDARLR DVPALSDGQG
AERAAPSRPV RAGVGLRSMF GTEVSSQPRP LDAVRVTVDG RTGRLVLPER VRVMFDDGEE
IEASVADIAV G