Gene Swit_4972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4972 
Symbol 
ID5196075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp80872 
End bp81597 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID640579408 
Producthypothetical protein 
Protein accessionYP_001260356 
Protein GI148550926 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATAA GCTCAGTTCA TTCGAACTCT CCTTTCTTCT TCGCGCCACA ACGGCGCACG 
CCCATGCGGG TCACGATCCC TGCCGTGGTC GCGCAGTCAG CGACGCTCGG TAACGAGGAG
CGCTGCGTCG TCGCTGCAAG GGGCTGGTCG ACCAAGCGCA AGATGGGCTG GCGGGCACAG
GCTCAGCCCG TCGCGGAGCG CCGCATCGTC GACCAGGATA CGCCACGGTC TACCATAGCG
TCGGGCGGCG AGGTAGAAGG TCGCGCCATC GCACGCGACC ATGCGGCATC GCTCCTGGCG
ATCGATCAAA GACGTACTCC CGCCATAGCG GGCGACCAGT TCGTCCAGGT CGGCGCGCAT
CAGGGCGCCG CAGCGGCGGC ACTGGGTACG AACCTGAACC TGCAGCCGCT GCATCGCGCC
GACGCTCGAT GTCCAGCTTG GCCAAAGGGC AATGATCCGG GCGGTGTCTG TCATGATCGG
AAGGATAGCG AAGCCCTCGC TCGCGCGTCC AGCAGCAGTT CCGAAAAGTC GGCCATGCCG
TTCCTTATTC CCTCTGACCG CCGCATCGAC GGTCCCTTCC TGGCTTGGCG TCCTCGCCGC
GGCACTTGCC AGCGCAAGCC CGGTGCCGGG CTTCTCCACA TCCGTTGCGA CCCTGTCGGG
TGCGCGGGCG CGCTATGCCC CGGCGGTCCG GTCGCCTGTC GGAAGGCCCC GATCGGCGGG
GTCTGA
 
Protein sequence
MPISSVHSNS PFFFAPQRRT PMRVTIPAVV AQSATLGNEE RCVVAARGWS TKRKMGWRAQ 
AQPVAERRIV DQDTPRSTIA SGGEVEGRAI ARDHAASLLA IDQRRTPAIA GDQFVQVGAH
QGAAAAALGT NLNLQPLHRA DARCPAWPKG NDPGGVCHDR KDSEALARAS SSSSEKSAMP
FLIPSDRRID GPFLAWRPRR GTCQRKPGAG LLHIRCDPVG CAGALCPGGP VACRKAPIGG
V