Gene Swit_4968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4968 
Symbol 
ID5196065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp76761 
End bp77195 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content66% 
IMG OID640579404 
Producthypothetical protein 
Protein accessionYP_001260352 
Protein GI148550922 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.749674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCC AGCCGGTGAC GATCGAGACC CTGCTTGGGG TTGCGCCCCG GAAAGGTGAC 
ACGCGCCTGG GGCTGAGCTA TTCGATTCTC GAAGGCCTGC CGGTCGGCGC GCTCGACCAT
CTCGCAGACA CGGTCGCGCC CAATGACAGC CGCTTCAAGT TCCGCCTGAT TCCCAAGGCG
ACGCTCGAGC GCCGCAAGAA ATCCGCGTCC AAGCGCCTGA CCAGCGAGGA AGGCGACAAG
CTGGCGCGGA TCGCCAAGGT GTTCAGCTTC GCGCTCGATA TCTATAAGGA TCCCGCCAAG
GTCCGCGACT TTCTCGGCCG CGCGCACCCT ATGCTCGACA ACAAGCCGCC GCTCGACGTG
GCGCTGGCGA CGGGTCCGGG AGCCGATGTC GTCATCAACC TGCTGGGACG GGCGGCTTAC
GGCGGCGGGG CGTGA
 
Protein sequence
MASQPVTIET LLGVAPRKGD TRLGLSYSIL EGLPVGALDH LADTVAPNDS RFKFRLIPKA 
TLERRKKSAS KRLTSEEGDK LARIAKVFSF ALDIYKDPAK VRDFLGRAHP MLDNKPPLDV
ALATGPGADV VINLLGRAAY GGGA