Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4962 |
Symbol | |
ID | 5195996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 70953 |
End bp | 71678 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640579398 |
Product | hypothetical protein |
Protein accession | YP_001260346 |
Protein GI | 148550916 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 0.341407 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.997775 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAA GCGCAGTCCT TGAAGCTCCA CCGGCTCCGC CCACAATCCC CGCCGCCGAG AGTACGGCGG CGCTTGCGCG CCGGGAGTGC AATGAGGCGA TCGACAGCGG CTCGGACACG GCCGTCGACG TGGCGGTCAA TTTCACGCTG CATTGCGCCG AGCTTTGCCT TCAGGCCAAT CCCACCGATC CCCAGCTTCG CGCATGGCAT GAACTGCTTC GTGATATCGC CGTCGGTCTC GACAGGGGCC AGCCCGAACT CGCGACGAGG CTTCGCGCGC TCGCAGCACG GGTCCACGAA GCGGTTCGCA TAGCAACGCG GAACCCGATC GGGGTCATCG CGGATCGCCC ACCCGCGCGG CAGGTGCTCG AAGCCATCTA CGCATTGGGC GACGGCAGCG AGCAGAGTAC AGTCCGCGAG CGGACCGGTC AGAGCCAGAG CCATTTTTCC AATATGCTCT CGCTTTTGAA AGGCTATGGG CTCGTTCACA GCAGCACGAG CCGCACCAGC GGCCGCAATC GCTGCCTTGC GTTGACGGAC GACGGCCGCT CGCTGCTGTT GGCGGCACGC CGAGACGGCA AGCTGCCTGC TGAAATCCCC GAGCCCTTGC CCGAGGCATT GCCGCGCCTC GCGCGCTCGG GTGCGGTGGG CGCAGGCTAT CAACCACCTT TTCCGGTGCG TGCAGTCATC CATAGTGCCG GTGCGCGGCA TCTCGTGAGA GCCTGA
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Protein sequence | MTTSAVLEAP PAPPTIPAAE STAALARREC NEAIDSGSDT AVDVAVNFTL HCAELCLQAN PTDPQLRAWH ELLRDIAVGL DRGQPELATR LRALAARVHE AVRIATRNPI GVIADRPPAR QVLEAIYALG DGSEQSTVRE RTGQSQSHFS NMLSLLKGYG LVHSSTSRTS GRNRCLALTD DGRSLLLAAR RDGKLPAEIP EPLPEALPRL ARSGAVGAGY QPPFPVRAVI HSAGARHLVR A
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