Gene Swit_4962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4962 
Symbol 
ID5195996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp70953 
End bp71678 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content66% 
IMG OID640579398 
Producthypothetical protein 
Protein accessionYP_001260346 
Protein GI148550916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value0.341407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.997775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA GCGCAGTCCT TGAAGCTCCA CCGGCTCCGC CCACAATCCC CGCCGCCGAG 
AGTACGGCGG CGCTTGCGCG CCGGGAGTGC AATGAGGCGA TCGACAGCGG CTCGGACACG
GCCGTCGACG TGGCGGTCAA TTTCACGCTG CATTGCGCCG AGCTTTGCCT TCAGGCCAAT
CCCACCGATC CCCAGCTTCG CGCATGGCAT GAACTGCTTC GTGATATCGC CGTCGGTCTC
GACAGGGGCC AGCCCGAACT CGCGACGAGG CTTCGCGCGC TCGCAGCACG GGTCCACGAA
GCGGTTCGCA TAGCAACGCG GAACCCGATC GGGGTCATCG CGGATCGCCC ACCCGCGCGG
CAGGTGCTCG AAGCCATCTA CGCATTGGGC GACGGCAGCG AGCAGAGTAC AGTCCGCGAG
CGGACCGGTC AGAGCCAGAG CCATTTTTCC AATATGCTCT CGCTTTTGAA AGGCTATGGG
CTCGTTCACA GCAGCACGAG CCGCACCAGC GGCCGCAATC GCTGCCTTGC GTTGACGGAC
GACGGCCGCT CGCTGCTGTT GGCGGCACGC CGAGACGGCA AGCTGCCTGC TGAAATCCCC
GAGCCCTTGC CCGAGGCATT GCCGCGCCTC GCGCGCTCGG GTGCGGTGGG CGCAGGCTAT
CAACCACCTT TTCCGGTGCG TGCAGTCATC CATAGTGCCG GTGCGCGGCA TCTCGTGAGA
GCCTGA
 
Protein sequence
MTTSAVLEAP PAPPTIPAAE STAALARREC NEAIDSGSDT AVDVAVNFTL HCAELCLQAN 
PTDPQLRAWH ELLRDIAVGL DRGQPELATR LRALAARVHE AVRIATRNPI GVIADRPPAR
QVLEAIYALG DGSEQSTVRE RTGQSQSHFS NMLSLLKGYG LVHSSTSRTS GRNRCLALTD
DGRSLLLAAR RDGKLPAEIP EPLPEALPRL ARSGAVGAGY QPPFPVRAVI HSAGARHLVR
A