Gene Swit_4955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4955 
Symbol 
ID5196039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp61838 
End bp62989 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content58% 
IMG OID640579391 
Productcobyrinic acid a,c-diamide synthase 
Protein accessionYP_001260339 
Protein GI148550909 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID[TIGR03453] plasmid partitioning protein RepA 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGTCC TGCATCGAAA AGCGCTGACG ATCCTTAAAC GGATTCGCGA CAGCGCGGTC 
GACCCCGAGA CCGGCAGCAA ACGCGGCCCA ACTTTTCCGA TCTCGAAAGC TGCGGCGCTC
GTCGGCCGCA CCGCCTCGGC GATCAGAGAA GCTGAGCGCG ACGGACGCTT GCCTAGCCGT
GATCGCACCG CCTCCGGCCA CAGGGTGCAA TATACCTTGG AAGAACTTGA CCATATGCGT
GAGGTATTCG GCACCCGCCC CTGGCGGGAG CCGACCGATA CGCCGGCGAT CATCTCGGTG
TGCAACTTTA AAGGTGGTGT CGGAAAATCC ACGATTGCGC TGCATCTGGC GCAGCACTTT
GCGATCAATG GCTATCGGGT GCTCTTCATC GACTGCGATA GCCAAGCGTC CTCGACGATG
ATGTTCGGGT ACCGGCCCGA CGTCGATCTT GAGGAGGAAG ACACGCTCTA CGGGCACTTC
CATAACCCCG AGCTGCTCGG CGTGCGCAAG ATCATCCGCA AGACACACTT CCACGGCCTC
GACCTCATTC CGTCGAACCT GAGGCTTTAC AATCTGGAAT ATGAAATCGC CGGTTACATG
GCGAAGAACC AAAACATGGA AATTATCGAT TTGATTGCTG AAGCGATCGA TACGGTGGTC
GACGACTACG ACATCGTGAT CATGGACCCG CCACCCGCGC TCGGCATGGT GTCGATGGCC
GTGCTGCAGG CTGCGAATTC GATGGTCATC CCGGTGCCGC CCAGCCTCGT CGATTTCGCA
TCGACAGTCT CCTTCATTGA TATGACCCGC ACGACTATGA AGCAGCTTGA GAAGCTCGCG
GGGCGGGGGC GCCCCGCCTA TAATTTCATT AGACTCGTGG GCAGCCGAGT GGATGAGACT
AAGTCGATGC ATCGGGAAAT CCTGTCGATG ATGCGGCAGG TTTTCGGCGG CTCGATGACG
CAGTCGGTGA TGGTCACCAG CGCGGAGATC GACAATGCGA GCTCGCGGAT GAAGACGGTG
TTTGAACTCG AAAAACCAGT GACCTCGCAC GAGGTTTATA ACCGGTGCAT GAAGCACTTG
AACGAGGTTT GCCGCGACAT CGAACAAGAT GTTCTGCGGA CTTGGGCCAG CAGGGCAGGG
GACCAAGTCT GA
 
Protein sequence
MDVLHRKALT ILKRIRDSAV DPETGSKRGP TFPISKAAAL VGRTASAIRE AERDGRLPSR 
DRTASGHRVQ YTLEELDHMR EVFGTRPWRE PTDTPAIISV CNFKGGVGKS TIALHLAQHF
AINGYRVLFI DCDSQASSTM MFGYRPDVDL EEEDTLYGHF HNPELLGVRK IIRKTHFHGL
DLIPSNLRLY NLEYEIAGYM AKNQNMEIID LIAEAIDTVV DDYDIVIMDP PPALGMVSMA
VLQAANSMVI PVPPSLVDFA STVSFIDMTR TTMKQLEKLA GRGRPAYNFI RLVGSRVDET
KSMHREILSM MRQVFGGSMT QSVMVTSAEI DNASSRMKTV FELEKPVTSH EVYNRCMKHL
NEVCRDIEQD VLRTWASRAG DQV