| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4953 |
|---|
| Symbol | |
|---|
| ID | 5196015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 59987 |
|---|
| End bp | 60550 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640579389 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260337 |
|---|
| Protein GI | 148550907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 65 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCATCG CCGACGTGCG AAACTACGCC GAGGCGGGCG AGCATGGCGT CGACCTCAGC
CATCTCGGCA TCAAAGCGGG ACAGAGACGG ATCGAGCGCC TCGCTCACTT TGGGAGGCTC
CACCGGTCGA CCGACGGGAC GGCGCGCGAA GCCGAATGCT ACTGCAAGGT CTGTGACGAG
ATAAGTCCTC CAAGCCTGCC GTCCGCTGAT TTCCACCAGC AACCCGGCAT CGGCGGCGCG
TGCCAGAAGT TTCCCCGCTC CAGATATGCT CAACTCGAGC TGCCGAGCCA CAACTCGCGG
ACTCGTAACC GGTCGAAGCT GCAAGAACGC GAGAAGTGGG AAAAGCTTGC CGGGGCGAAG
GGTGTTGCCC GCTACGGCCG CGGCGCGAAG GCGATGTTCC TCCATGGCAT CGAGCCGTTG
GAGGCCCGTT GCCGCGGCCT CGGCAATCTG GCGAAGAAAG CGCGCGACGA TGGCCTCACT
GTCCCGCGGC GTCAGTCGAA GCGCTTTGTC AGCAATGGCG AGGCAGGGGA GGGGAGTGGC
CGTTACCTCC ATCGAATGAA GTAG
|
|---|
| Protein sequence | MLIADVRNYA EAGEHGVDLS HLGIKAGQRR IERLAHFGRL HRSTDGTARE AECYCKVCDE
ISPPSLPSAD FHQQPGIGGA CQKFPRSRYA QLELPSHNSR TRNRSKLQER EKWEKLAGAK
GVARYGRGAK AMFLHGIEPL EARCRGLGNL AKKARDDGLT VPRRQSKRFV SNGEAGEGSG
RYLHRMK
|
|---|
| |