| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4948 |
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| Symbol | |
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| ID | 5195992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | + |
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| Start bp | 55089 |
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| End bp | 56648 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640579386 |
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| Product | nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein |
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| Protein accession | YP_001260334 |
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| Protein GI | 148550904 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 0.777522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGGG TCGTATCGGT CTACCTGCCG CACTGGTCGA CAGACCGGCT GCGGCGGCAG
ACCGCCAAGT CGCCGCCTGA CCGGCGCGAC ACACCAACCC CTACACGCCC GCTCGTCACG
GCGATCCCCG ATCATGGCCG GCGTATCGTC GCGGCGGTCG ATGCCGGCGC ACGCGCGCTC
GGCATTGCGG CCGGCATGAC CATCACCAAG GCGCGCTCGT TCGCGCCGGA GCTCGACGTC
GTCGACGCGC AACCTGAAGC CGATGTCGAG GGATTGCGCC GCCTGGCGCT ATGGGCGGGC
CAGCGATACT CGCCGATCGT CGCGCCCGAT GCACCTGACG GTCTGTGGCT CGACATTACC
GGCTGCGCCG CCCTGTTCAG CACCGAGGCG GCCTTGCTCA AGGATCTCCA CCGCCGCGTG
GCCGCCTTCG GCGTATCGGT CCAGATCGCC GTGGCCGACA CCGCGGGCTG TGCCCATGCG
GTAGCGCGGC ATGTTCCCGC CGGTCGGCCG GTGACGATCG AACCTAGTGA TCATCGTAAA
GCGATCGCAC TCCTTCCTAT AGCGGCGCTG CGGCTCGAAG CCGATGTCGT TGAGGGACTG
CGAAAGCTCG GCTTCGAACG TGTCGAGCAA TTGATCGGCG CTCCGCGCGG GCCGCTCGCC
AAGCGGTTCG GCCGCAGCCT GCACCGCCGG CTCGATCAGG CGCTCGGCGC TGTGGCCGAA
CCGATCGAGC CGATATTCCC CGAGCATCTG CCCCGCGCGC GCCGCGGCTT CATGGAGCCA
ATCGCGACAG CCGAGGCCTT TGGACAAGTG ATCGGCGATC TGGTCGCCGA TATCGTCGAT
CAGCTTGGCC GGGTGGGCAA GGGTGCGCGG CGCCTCGATT GCTATTTCCA CCGGGTGGAC
GGGCATACGC AGGTCATCCG GGTCGGCACG GCCACGCCGA GCCGCGACCA GGCCCATCTG
TCGAAACTTC TTTGCGCGAA GATCGAGACC GTCGAGCCAG GTCTTGGGAT CGAATCGATG
ACCTTGCTGG TCTCGCTGAT GGAGCCCGTC GCCGCGCGAC AGGGCGAGAG CCTGGAGCGC
CTGGGCAAGC CCGGGCCGGA TCTCGCCGCT CTGGTTGATA CCCTCTCCAA CCGCTTCGGC
AGTCGGTGCC TGCACCGCAT GGCGCCGCAC CCGAGCGAGA TGCCCGAGCG CTCGGCGACG
AGTTCACCGG CGCTCGATAC CGCGCGGGGC GCGGGATGGG ACGATGATCT GCCGCGCCCC
GCACGGATGC TGGCGCGGCC CGAAGCGATC GAGGTCATCG CCCTTCTGCC CGATGACGCG
CCGAGGATGT TCATCTGGCG GGGCAAGCGA TACCGGGTCA CGCAGGGCGA CGGACCCGAA
CGGCTGCACG GCGAATGGTG GCGTGACGCC GGGATCGAGA GCGAGCGGCC GCTCAGCATC
CGCGACTATT ATCAGGTCGA GACCCTGAGC GGTGGCCGTT ACTGGCTGTT CCGGGCAGGC
GATGGAGAGA GCCCGTCGAC CGGATCGATG CGCTGGTTCC TGCACGGGGC GTTCGCGTGA
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| Protein sequence | MRRVVSVYLP HWSTDRLRRQ TAKSPPDRRD TPTPTRPLVT AIPDHGRRIV AAVDAGARAL
GIAAGMTITK ARSFAPELDV VDAQPEADVE GLRRLALWAG QRYSPIVAPD APDGLWLDIT
GCAALFSTEA ALLKDLHRRV AAFGVSVQIA VADTAGCAHA VARHVPAGRP VTIEPSDHRK
AIALLPIAAL RLEADVVEGL RKLGFERVEQ LIGAPRGPLA KRFGRSLHRR LDQALGAVAE
PIEPIFPEHL PRARRGFMEP IATAEAFGQV IGDLVADIVD QLGRVGKGAR RLDCYFHRVD
GHTQVIRVGT ATPSRDQAHL SKLLCAKIET VEPGLGIESM TLLVSLMEPV AARQGESLER
LGKPGPDLAA LVDTLSNRFG SRCLHRMAPH PSEMPERSAT SSPALDTARG AGWDDDLPRP
ARMLARPEAI EVIALLPDDA PRMFIWRGKR YRVTQGDGPE RLHGEWWRDA GIESERPLSI
RDYYQVETLS GGRYWLFRAG DGESPSTGSM RWFLHGAFA
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