Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4947 |
Symbol | |
ID | 5195977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | + |
Start bp | 54437 |
End bp | 55168 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640579385 |
Product | hypothetical protein |
Protein accession | YP_001260333 |
Protein GI | 148550903 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 0.968147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAG CCAGCGTCAT CGAAAATCTG CGAGCGCGCA TCGCGCAGAT CGAAGGCGTG GGCGCCCGCC ATGGATCGAT TCCGTTCGGG CTGGAGGCTA TCGACGCCAG GCTGCCGGGC GGCGGCATAG CGAGTGGCGC GCTGCATGAA GTCGCCGGCA GTCCCGATCT TGCCGACGAT GCGAGCGCGA CGATCTTTCT CGCCGGAATC CTGGCGCGGG TGGAAGGCCC GGTCCTCTGG TGCCTGCGGT GGCGCGACCT GTTCGCGCCC GCGCTCCATC TCGCGGGGCT CCACCCCGAT CGCGTAATCT ATGTCGAGGC GGGCAGCGAC GCGAATGTCC TGCTCGCCAT GGAGGAATGC CTGCGCCATC CCGGCCTTGG CGGCGTGGTT GGCGAGGTCA CCAAATATAG CACCACGGCA TCGAAGCGGC TCCAGCTCGC CGCCGAGGGA TCAGGCGTCG CCGCCTTCGT TTTTCGGCGC GCGTCCAAGC CCGAGCAGGC CGCCGAGGGA ACCGCCGCTG TCACGCGGTG GCGGATAACA GCCAGCCCCA GCGAAGATCT CGGCATCCCG AGCCTCGGCC GCGCGCGCTG GCACGTCGAG CTGGAGCGGG TGCGCGGGGG GAATCCGCAC GCATGGATAG TGGAGGGCTG CGATGCGACG GGTCGTATCG GTCTACCTGC CGCACTGGTC GACAGACCGG CTGCGGCGGC AGACCGCCAA GTCGCCGCCT GA
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Protein sequence | MREASVIENL RARIAQIEGV GARHGSIPFG LEAIDARLPG GGIASGALHE VAGSPDLADD ASATIFLAGI LARVEGPVLW CLRWRDLFAP ALHLAGLHPD RVIYVEAGSD ANVLLAMEEC LRHPGLGGVV GEVTKYSTTA SKRLQLAAEG SGVAAFVFRR ASKPEQAAEG TAAVTRWRIT ASPSEDLGIP SLGRARWHVE LERVRGGNPH AWIVEGCDAT GRIGLPAALV DRPAAAADRQ VAA
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