Gene Swit_4947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4947 
Symbol 
ID5195977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp54437 
End bp55168 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content69% 
IMG OID640579385 
Producthypothetical protein 
Protein accessionYP_001260333 
Protein GI148550903 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value0.968147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAG CCAGCGTCAT CGAAAATCTG CGAGCGCGCA TCGCGCAGAT CGAAGGCGTG 
GGCGCCCGCC ATGGATCGAT TCCGTTCGGG CTGGAGGCTA TCGACGCCAG GCTGCCGGGC
GGCGGCATAG CGAGTGGCGC GCTGCATGAA GTCGCCGGCA GTCCCGATCT TGCCGACGAT
GCGAGCGCGA CGATCTTTCT CGCCGGAATC CTGGCGCGGG TGGAAGGCCC GGTCCTCTGG
TGCCTGCGGT GGCGCGACCT GTTCGCGCCC GCGCTCCATC TCGCGGGGCT CCACCCCGAT
CGCGTAATCT ATGTCGAGGC GGGCAGCGAC GCGAATGTCC TGCTCGCCAT GGAGGAATGC
CTGCGCCATC CCGGCCTTGG CGGCGTGGTT GGCGAGGTCA CCAAATATAG CACCACGGCA
TCGAAGCGGC TCCAGCTCGC CGCCGAGGGA TCAGGCGTCG CCGCCTTCGT TTTTCGGCGC
GCGTCCAAGC CCGAGCAGGC CGCCGAGGGA ACCGCCGCTG TCACGCGGTG GCGGATAACA
GCCAGCCCCA GCGAAGATCT CGGCATCCCG AGCCTCGGCC GCGCGCGCTG GCACGTCGAG
CTGGAGCGGG TGCGCGGGGG GAATCCGCAC GCATGGATAG TGGAGGGCTG CGATGCGACG
GGTCGTATCG GTCTACCTGC CGCACTGGTC GACAGACCGG CTGCGGCGGC AGACCGCCAA
GTCGCCGCCT GA
 
Protein sequence
MREASVIENL RARIAQIEGV GARHGSIPFG LEAIDARLPG GGIASGALHE VAGSPDLADD 
ASATIFLAGI LARVEGPVLW CLRWRDLFAP ALHLAGLHPD RVIYVEAGSD ANVLLAMEEC
LRHPGLGGVV GEVTKYSTTA SKRLQLAAEG SGVAAFVFRR ASKPEQAAEG TAAVTRWRIT
ASPSEDLGIP SLGRARWHVE LERVRGGNPH AWIVEGCDAT GRIGLPAALV DRPAAAADRQ
VAA