Gene Swit_4946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4946 
Symbol 
ID5195935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp53816 
End bp54247 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID640579384 
Producthypothetical protein 
Protein accessionYP_001260332 
Protein GI148550902 
COG category[S] Function unknown 
COG ID[COG5579] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value0.38598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGG ATTTCCACCT CGACCGATTC GTGACGGCAC AGGCGACGAC CTATGACACA 
GCGCTCGCCG AGATCCGGCG CGGCGCCAAG CGCAGTCATT GGATGTGGTT CATCTTTCCG
CAGATCGCCG GTCTCGGCAC CAGCGACATG GCGCGGCGCT ATGCCATCGG ATCGCTGACC
GAAGCGCGCG CCTATCTGGC GCATCCCCTT CTTGGGCTCC GACTTCGCGA TTGTGTCGGC
GCGCTGCAGG ATCTGATTGG GACGTCCGCG ATCGCGGTGT TCGGCGAGGT CGATGCGATG
AAGCTCCGCT CCTGCCTGAC CCTGTTCGCC GAAGCGGGCG GAGGCCCGCT CTTTGTCGCG
GCGCTCGATC GGTGGTTCGA CGGTGCCGCG GACCCAGCGA CACTTGTGAA GGTGGGACCT
TCCTCGCCCT AG
 
Protein sequence
MAADFHLDRF VTAQATTYDT ALAEIRRGAK RSHWMWFIFP QIAGLGTSDM ARRYAIGSLT 
EARAYLAHPL LGLRLRDCVG ALQDLIGTSA IAVFGEVDAM KLRSCLTLFA EAGGGPLFVA
ALDRWFDGAA DPATLVKVGP SSP