| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4940 |
|---|
| Symbol | |
|---|
| ID | 5195969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 50123 |
|---|
| End bp | 50680 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640579378 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001260326 |
|---|
| Protein GI | 148550896 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 0.110846 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGTC CTTGCCGAGG CGCAGGTGCG CGCAAGCCCG TAGCCGGGCT TCTCCTCTGC
CGTTTCGACC CTGCGGGTGC GCAAACCTGC TGTGCCCCGG CGCGCCGGTC CCTGTTGAAA
GACCCCGATC GGCGGGGTTT GTCGAAAAAC ACAGGATCGT ACATCATGCC CGATCAAAAC
GCCTCCCCTG CCCCAGCGTC GGATCGCATC GCGACCATCG CCCGCCTCAA CGATGCCCTC
CGGCAGAACC TCACCCTGCC CGGCCACAAT CGTGTGGTGA TGACCATTGG TGTCCAGGAG
CTGATCGGCG ACGTCAGCCT GTTCCGCAAC TTCCATGCCC AGGCAGAACT GCTGCGCACC
ATCCGCGACT ATGACGATTT TGGTCCCGAC GTTGATCCGC ACGGCGAGCG CGATTTCGGG
CGGTTCGAAT TCCGGGGTGC CGCGCTGTAC TGGAAGATCG ATTATTATGA TCGCACGCTC
GATTTTGGCT CGCCCGATCC TGCCGACAGC CAGGTCACCA CGCGCGTGCT GACGATCCTT
CTAACGAGCG AATATTGA
|
|---|
| Protein sequence | MSGPCRGAGA RKPVAGLLLC RFDPAGAQTC CAPARRSLLK DPDRRGLSKN TGSYIMPDQN
ASPAPASDRI ATIARLNDAL RQNLTLPGHN RVVMTIGVQE LIGDVSLFRN FHAQAELLRT
IRDYDDFGPD VDPHGERDFG RFEFRGAALY WKIDYYDRTL DFGSPDPADS QVTTRVLTIL
LTSEY
|
|---|
| |