| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4921 |
|---|
| Symbol | |
|---|
| ID | 5195910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 33832 |
|---|
| End bp | 34722 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640579360 |
|---|
| Product | 3-keto-5-aminohexanoate cleavage enzyme |
|---|
| Protein accession | YP_001260308 |
|---|
| Protein GI | 148550878 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 0.197144 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.584863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCAC GCAAAGTTAT TGTCACAGTC GCGCCAACCG GCGGGATGGC GCTCAAGTCG
CAGAATCCTG CGCTTCCAAC ACAGCCCCAG GAAATTGCCG ATGACGTGTA CCGCTGCTAT
AATGCTGGTG CGAGCGTCGT TGCGGTTCAT GCGCGAAGGC CAGAAGACGA CGGGGCAACC
TGCAATCCCG CCATCTACCG TGACATCAAT GAGCGCATTC GCTCGCACTG CAACATTGTT
CTCAACAATT CGACTGGCGG CGGCGTTCAT GGCGATATGG TGCGCCAGGC GGCCAACGGC
TATTGGGAAA TTCTTTGGGA AGAGCGCATC AAAGGGATCG AAGCTGGCGC AGAAATGTGC
ACGCTGGATC CCACAACCAT CGTTGCTTCT TTCGATGGCA AAGAGATATT GATGAATACG
TCGCCGTCGC GCTGTCGCGA ACTGGCGATC AAGATGCAGG AAAAGGGCAT CAAGCCCGAA
TGGGAAGTGT TCAGCCCGAC GCATCTGCTC CAGGATGTCG TTGCTTGCAT CAAGGAAGGG
CTCGACAAAG CGCCTTATTT CATAAATGTC GTGCTTGGCG TCAACCAATT CCAAGGCGCA
TTGCCTTACT CGCCGAAGAT TCTGCAGCAA ATGGTTGATA TCCTGCCTGA AGGCTCGTTA
TTCAACGTAA GTGCGGTCGG GCCGGCCCAG CTCAATGCAG GAGTTCTTTC GTTGCTACTG
GGCGGGCATG TACGTGTCGG CCTCGAAGAC AATCTTTATT ACGAGCGCGG GCAACTCGCG
ACGAATGTGC AGCAGGTCGA TCGGATCGTG CGCATCATCC GTGAATTGGG GCTCGAGCCA
GCTACCCCTG ATGAGGCGCG TGAGATCATG GGCCTCCCGC TGCTCGGATA G
|
|---|
| Protein sequence | MAARKVIVTV APTGGMALKS QNPALPTQPQ EIADDVYRCY NAGASVVAVH ARRPEDDGAT
CNPAIYRDIN ERIRSHCNIV LNNSTGGGVH GDMVRQAANG YWEILWEERI KGIEAGAEMC
TLDPTTIVAS FDGKEILMNT SPSRCRELAI KMQEKGIKPE WEVFSPTHLL QDVVACIKEG
LDKAPYFINV VLGVNQFQGA LPYSPKILQQ MVDILPEGSL FNVSAVGPAQ LNAGVLSLLL
GGHVRVGLED NLYYERGQLA TNVQQVDRIV RIIRELGLEP ATPDEAREIM GLPLLG
|
|---|
| |