Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4918 |
Symbol | |
ID | 5195885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009508 |
Strand | - |
Start bp | 29331 |
End bp | 31400 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640579357 |
Product | resolvase domain-containing protein |
Protein accession | YP_001260305 |
Protein GI | 148550875 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.79279 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGCA ATGATCTCCT TCCAGTCACG GTGCTCAAGC GCAAAGCTGT GGTGTATGTC CGACAGTCGA CCCCGGGTCA GGTCCAGAAC AACCTGGAGA GCCAGCGCCG ACAATATGAG CTTGTCGATG TTGCCCGACG CTGGGGATTT CACGATGTCG AGGTGATCGA CGATGACCTT GGTCGGACCG CCAGCGGCAC TGTCGACCGC CCCGGTTTCG AACGACTGGT CAGCGGCCTG TGCACGGGCA AGGTTGGCGC GGTGCTTTGC TTGGACGCAT CGCGCCTTTC CCGTAATGGC CGGGACTGGC ACCACCTTTT GGAGCTGTGT GGCCTGGTTG AAGCGCGCGT GATCGATCTC GACGGGGTAT ACGATCCCTG TCGACCAAAC GATCGATTGT TGTTGGGCAT GAAGGGCAGC ATCAGCGAGT TTGAGCTTGG CATTTTGCGA ACACGCATGC TTGACGCGGC GCGCGCCAAG GCAAGGCGGG GAGAACTGCG CCTCAGTGTT CCGATCGGCT ATATCTGGCA CCGCGAATAC GGCCTGGGGC TGGATCCCGA TATCCGGGTA CAGGAGGCGA TCCGCCTCAT CTTTTCGCGT TTCCGCGAGC TTGGCAGCGC CCGCCAGGTG CTGATTTCGC TGACAGCTGA CAATTTCCAT TTTCCCCGCC CTTCTGACGG CCGCAAAACG GTGTCCTTCG ACTGGGTGCC GGTTCGCTAT CGAAGCGTTA TTTCGATCCT GAAGAACCCC TTCTACGCTG GGGTCTATGT CTATGGTAAA AGCGAGAAGC GAACCGAGAT TGTCGATGGC AGGGCACGCA AAAGTTACGG CCACAGCAAG CCCTTTGGAA CGTGGGAAGT GCTGCTCCAG GATCATCACG AAGGCTATAT CGATTGGAGT GAGTTTGAAA GGAACCAGAG CCATATCGCC GTCAACGCCT TCGGACAGAA GGGCGGCATC AAGTCTGGTC GTGGTGGCCG CGCGTTGCTC GCGGGCCTGC TCACCTGCGG CCGATGTGGA AGACGGTTGG GCGTTGTCTA TTCGGGCCGG CCTCCGGGTC ATCCCTATTA CCGCTGCGAA CGTATCAACC AGATGCTGGC CAAGCCACGA TGCATGACTT TTGGCGCATC TCGCATCGAC CCTGCCATAG GCAAAGAGAT ATTGAGAGCC GTGACGCCGA TGGCGATCGA GGCCGCAATG GAAGCTGATC GGGCGCATCG GGATAATCTG GAAGAACGGC ACCGCATGGT GGAGCTGGAC TTGCAGCAAG CCCGATACGA GGCATCTCTC GCTGAACGTC GCTATGCTGC CTGCGACCCT GATAACCGCC TGATCGCTGC CCAACTCGAG AATAGCTGGG AAGCAGCGCT CAGGCGTGTG GAAGCCTGTG AAGCGGGTTT GGCCCAAGCG CGACAAATCG ATCTGGCCGC GCCGGTGCCA GATTTTGCTG GCATTGCCAC CGACCTGGAG ACCGCTTGGC GCTCGCCTAA CGTCGACATG CGTTGTCGTC AGCAGCTCCT CCGCACGCTC GTGACCGATA TCATCGCTGA TGTCGATGAA GAGCAACGTG AAGTCATTTT GACGATCCAC TGGAAAGGTG GCCAACATTC TCAGCTGCGC ATTCGCAAAC CCAAAGCAGG CGAACATGGC CAGAGTACGC CCGAAGCCGC CCTTGCCATC ATCCGCTCCA TGGCCACCCG GTGGTCCGAT GCAGACATTG CCGCCACTCT CAACCGGATG GGAATGCAAA CCGGACAAGG CAAGACCTGG ACAGCGCGCC GTGTCGGCTC GCTGCGCACT GTCCACAAAA TCCACGGCTA CCGATCCGCC GAAAAGAATG GAGAGTGGCT CACGCTGACC GAAGCCGCCA AAAAGCTTGG GGTTACTGCC CATCGGGTCC GTCGACTGAT CAAGGAGGGC GTGCTCCCTA CCGAGCAAGT TGTACCCGAT GCGCCGCACC AAATCCGAGC CACGGACCTG GAAAAGGACG AAGTGACCCA GTTCCCGCGT CACAGAGGCC CGTGTCGCAT CAAAATGGAA AACCAAAAGT CCCTGTTTCC GGACATTTGA
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Protein sequence | MTGNDLLPVT VLKRKAVVYV RQSTPGQVQN NLESQRRQYE LVDVARRWGF HDVEVIDDDL GRTASGTVDR PGFERLVSGL CTGKVGAVLC LDASRLSRNG RDWHHLLELC GLVEARVIDL DGVYDPCRPN DRLLLGMKGS ISEFELGILR TRMLDAARAK ARRGELRLSV PIGYIWHREY GLGLDPDIRV QEAIRLIFSR FRELGSARQV LISLTADNFH FPRPSDGRKT VSFDWVPVRY RSVISILKNP FYAGVYVYGK SEKRTEIVDG RARKSYGHSK PFGTWEVLLQ DHHEGYIDWS EFERNQSHIA VNAFGQKGGI KSGRGGRALL AGLLTCGRCG RRLGVVYSGR PPGHPYYRCE RINQMLAKPR CMTFGASRID PAIGKEILRA VTPMAIEAAM EADRAHRDNL EERHRMVELD LQQARYEASL AERRYAACDP DNRLIAAQLE NSWEAALRRV EACEAGLAQA RQIDLAAPVP DFAGIATDLE TAWRSPNVDM RCRQQLLRTL VTDIIADVDE EQREVILTIH WKGGQHSQLR IRKPKAGEHG QSTPEAALAI IRSMATRWSD ADIAATLNRM GMQTGQGKTW TARRVGSLRT VHKIHGYRSA EKNGEWLTLT EAAKKLGVTA HRVRRLIKEG VLPTEQVVPD APHQIRATDL EKDEVTQFPR HRGPCRIKME NQKSLFPDI
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