Gene Swit_4914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4914 
Symbol 
ID5195887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009508 
Strand
Start bp26328 
End bp27143 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content65% 
IMG OID640579354 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001260302 
Protein GI148550872 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.297532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA TCGATCATGA AGCGCTGGTA GCGATGTTGG ACCGGCTGAA GCTCTCGGCG 
ATCCGGGACC AGCTCGACAC GCTGCTCGAC GAGGCGGCGC GCTCGAAGAT GACCCTGCGC
GAAGCGCTGG CGTTCTTCGT CTCCCGCGAG ATCGCGCGGC GCGACGAGCG CCGTATCTCC
ATGGCGAGCA AGCTCGCCCA GTTCCCGTTC GTACGCGAGA TCGACGGCTT CGAGTTCGAC
GCGCAGCCTT CGCTCGACCC TGGCCAGATC CGGGAGCTGG CGACGTGCCG GTGGATCGCC
CACGGCGACA CGACGTTGCT CCTCGGGCCT CCGGGAACCG GCAAGACGCA CCTCGCCGTG
GCCTTGGGGC GGGAAGCGAT CCGGCAGAAC TACTCGGTCC AGTTCGTCAC CGCGGCGACG
TTGGTGGCAA TGCTCGCCAA GGCGCACGAC GACGGATCAC TCGACAAGCA GTTGACGCAG
CTTGCCCGGC CCAAGCTGTT GATCATCGAC GAACTCGGCT ATCTGCCGTT CGAAGCCAAC
GCCGCCCATC TGTTCTTCCA GCTGGTATCG CGCCGCTACG AGAAAGGCTC GATCCTGATC
ACGTCGAACC GGTCAGTTGG GGAATGGGGC GGCGTCTTCG GCGATCCGGT CGTGGCCACG
GCAATCCTGG ATCGGCTGCT TCACCACTCG ACCGTGATCA CCATCCGCGG CGACAGCTAC
CGAGTAAGCG GGGTCTGGCG ACCGCCTTGC GCAGCGCCCA TTAGCCGGGA TGATTGCCGC
TCTTTAAGCG GGGTGGCCGG TGTCGGACGA GATTGA
 
Protein sequence
MAEIDHEALV AMLDRLKLSA IRDQLDTLLD EAARSKMTLR EALAFFVSRE IARRDERRIS 
MASKLAQFPF VREIDGFEFD AQPSLDPGQI RELATCRWIA HGDTTLLLGP PGTGKTHLAV
ALGREAIRQN YSVQFVTAAT LVAMLAKAHD DGSLDKQLTQ LARPKLLIID ELGYLPFEAN
AAHLFFQLVS RRYEKGSILI TSNRSVGEWG GVFGDPVVAT AILDRLLHHS TVITIRGDSY
RVSGVWRPPC AAPISRDDCR SLSGVAGVGR D