| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4905 |
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| Symbol | |
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| ID | 5195873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 18798 |
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| End bp | 20171 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579346 |
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| Product | IS4 family transposase |
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| Protein accession | YP_001260294 |
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| Protein GI | 148550864 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3666] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 75 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.24611 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGCG AGCGGACGGT GGCGCAGGAA GCGCTGTTCT ACAGCTTCAA TCTGGAGCGG
CATGTGCCGC CGGATCATCT GCTACGCTCG ATCGACCGGT TCGTGGACCT GTCGGATATC
CGCGAGCACC TGCGGCCTTA TTATAGCGAG ACGGGTCGGC CATCGATCGA CCCAGAGTTG
ATGATCCGGA TGCTGATCAT CGGCTATTGC ATGGGCATCC GGTCGGAGCG ACGGCTGTGT
GACGAGGTGC ATCTCAACCT CGCCTATCGC TGGTTCTGCC GGCTGGGGCT GGAGGGCGAC
GTGCCCGATC ACTCGACGTT CTCGAAGAAC CGGCATGGAC GCTTCCGCGA CAGCGATCTG
CTGCGGCAAC TGTTCGAGAT GACGGTGGCG CGCTGCATGG CCGAAGGACT GGTCGGCGGC
GAAGGCTTTG CGGTCGATGC GAGCCTGATC CGGGCGGATG TCCACCGGCA ACGGTCGGTG
CCGGGTGAAG AGGGCTTGCC GCCGGAAGCG GTCGGTCGTG CGGTCGCTGA GTATCTGGAC
GTGCTGGACG ATGCGGCGTT CGGCGGTGCA ACGCCGGTGA CACCCAAGCG GATCAATCTC
ACCGATCCAG CCTCGCGCTG GACCGCCGCC ACGCGCGAGG CGGCCTTTTA CGCCTACAGC
ACCAACTATC TGATCGACCT CGATCATGCG GTCATCGTCG ATGTCGAGGC GACCACCTCG
GTGCGGCAGG CGGAGGTGAC CGCCCAGCGC AGGATGATCG AGCGAACGCA GGATCGCTTC
GGCATCTGGC CCGAGCGCCT CGTGGCCGAT ACCGCCTATG GCTCTGCCCC CAACCTGGCC
TGGCTGGTCG AAGAGATGAG CATCGAGCCG CATATTCCGG TGTTCGACAA GTCCGCTCGG
ACTGACGGCA GCTTCGAGCG CGCCGACTTC GTCTATGACC ATGATGACGA CAGCTACATC
TGCCCGGTCG GCAACCGCCT ACGGCGTTCC AACCGCAACT TCAGCACGCC CCGTGATCGC
GTCGATAAGG ACGGTTCGAT CCGCTACCGC GCGCGTCAGC AGGACTGCCA GAGCTGTGCT
CTGCGCCAGC GATGCACGCC CAACATGCCC GCTCGCAAGG TCACCCGATC GATCCACGAA
GGCGCGCGCG ATCTGGCCCG CGACATCGCC ACCACCGACG CGTATCTCGT CTCACGTCGC
CAGCGCAAGA AGGTCGAGAT GCTGTTCGCC CACCTCAAGC GCATCCTGAA GCTGGATCGC
TTGCGCCTGC GCGGCCCCAA TGGCGCAAGA GACGAGTTCC ACCTCGCCGC AGCGGCACAG
AACCTCCGCA AAATGGCAAA GATCATCCCG ATGGCCAGGC CCGCACCGGC CTGA
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| Protein sequence | MMGERTVAQE ALFYSFNLER HVPPDHLLRS IDRFVDLSDI REHLRPYYSE TGRPSIDPEL
MIRMLIIGYC MGIRSERRLC DEVHLNLAYR WFCRLGLEGD VPDHSTFSKN RHGRFRDSDL
LRQLFEMTVA RCMAEGLVGG EGFAVDASLI RADVHRQRSV PGEEGLPPEA VGRAVAEYLD
VLDDAAFGGA TPVTPKRINL TDPASRWTAA TREAAFYAYS TNYLIDLDHA VIVDVEATTS
VRQAEVTAQR RMIERTQDRF GIWPERLVAD TAYGSAPNLA WLVEEMSIEP HIPVFDKSAR
TDGSFERADF VYDHDDDSYI CPVGNRLRRS NRNFSTPRDR VDKDGSIRYR ARQQDCQSCA
LRQRCTPNMP ARKVTRSIHE GARDLARDIA TTDAYLVSRR QRKKVEMLFA HLKRILKLDR
LRLRGPNGAR DEFHLAAAAQ NLRKMAKIIP MARPAPA
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