| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4895 |
|---|
| Symbol | |
|---|
| ID | 5195881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009508 |
|---|
| Strand | - |
|---|
| Start bp | 9537 |
|---|
| End bp | 10385 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640579336 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_001260284 |
|---|
| Protein GI | 148550854 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 0.0335992 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.294667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGATAG AAATGACCCA GCTACCCAGC AATTTCATCG CAACTTGTGG ATACCGCACG
CATTACATCG AGATGGGTGA GGGCAAGCCA CTGATCCTTA TCCACGGCGG CGGTGCTGGC
GCGGACGCCC GCGGAAACTG GGAAAAATTG TGCATGCCAC TACTGGCAAA GGACCGCAGG
GTAATAGCCC TCGATATGGT CGGTTTTGGC TATAGCGATG CACCCGATCC GGAAGGATTC
GATTATGGTC TGGAGTGTCG CGTTGATCAG CTAATCGCCT TTATCGAGGC CATGAATCTG
GTCGAAGCAA CCGGTCCCGT GGATATCATC GGCAATTCCA TGGGCGGGCG CACCACACTG
GCTACCGCCA TACGCCGCCC CGACCTCGTC GGTGACATGG TCCTGATGGG TAGCGCTGGG
GTCGACCGCT CGATGGGCGG CGGGGTTGCG CCGCTGACAG AATACGACTT CACTTACGCC
GGCATGGAAC GTGTCGTCGC AGCGTTGACC AATGATCACT ACATTCCGGA CCCAGACATG
GTGCGATACA GGCTCGAACT GTCACAGCGG CCTGCCTATG CCAAGGCCCT CAGCGCTACC
TTCAAGGCGC TTGTAGCGCG ATCCGGCCTG TGGATCGAGG ATGAGAAAAT TGCCGAGGTC
CAGCACCGGA CCCTTGTGGT TAACGGGAAG GCTGACAAGG TTGTCCCACC CGAACACGCC
TATAAATTCC TCTCTCTCCT AACCAATTCA ACCGGCGTCA TACTCCCCCA CTGCGGGCAC
TGGGCAATGA TCGAGCATCC GGTTGCATTT GCTCATATTA CTTCAGCCTT TTTCGCTCGG
AAATTCTAG
|
|---|
| Protein sequence | MRIEMTQLPS NFIATCGYRT HYIEMGEGKP LILIHGGGAG ADARGNWEKL CMPLLAKDRR
VIALDMVGFG YSDAPDPEGF DYGLECRVDQ LIAFIEAMNL VEATGPVDII GNSMGGRTTL
ATAIRRPDLV GDMVLMGSAG VDRSMGGGVA PLTEYDFTYA GMERVVAALT NDHYIPDPDM
VRYRLELSQR PAYAKALSAT FKALVARSGL WIEDEKIAEV QHRTLVVNGK ADKVVPPEHA
YKFLSLLTNS TGVILPHCGH WAMIEHPVAF AHITSAFFAR KF
|
|---|
| |