| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4887 |
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| Symbol | |
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| ID | 5195997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009508 |
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| Strand | - |
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| Start bp | 10 |
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| End bp | 1215 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640579328 |
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| Product | beta-ketoadipyl CoA thiolase |
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| Protein accession | YP_001260276 |
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| Protein GI | 148550846 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0589853 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGG CGTTTATTTG CGATGCCGTC CGTACACCCA TCGGGCGCTT CGGCGGCGCG
CTCTCGTCAA TCCGGCCTGA CGACCTCGCG GCTGTGCCGC TCGCTGCGCT CAAGGCTCGT
AACCCGGCGC TGGACTGGTC CCGCGTCGAT GATGTGTTGT TCGGCTGTGC CAACCAGGCT
GGCGAAGACA ACCGGAACGT GGCGCGAATG GCCGTGCTGC TGGCAGGGCT GCCGGTGGCG
GTCCCCGGAA CCACAGTGAA CCGCCTGTGC GGTTCGGGCT TGGACGCTGT CGGTCTGGCG
GCCCGCTCCA TCCGCGCAGG GGACGCGGAC CTGATGCTGG CCGGCGGCGT GGAAAGCATG
AGCCGCGCCC CCTTTGTCAT GGGCAAGGCC GATGCACCAT TTTCCCGGAG CCAAAAGATC
GAGGATACGA CAATCGGCTG GCGTCTCGTC AACCCGGCCA TGGAGTCTGC CTACGGCGTC
GACTCGATGC CCGAAACCGG TGAGAACGTG GCAAAGGAAT GGGGCATCAG CCGCGAGGCG
CAAGACGCTT TCGCACTGGC AAGCCAGGCG AAGGCGGCGG TGGCGCAAGT CAATGGAAGA
CTCGCCGCTG AGATCGTTGC GGTGCGCATA CCGCAGAGAA AGGACGATTT CATCGTGATT
GATCGCGATG AGCACCCCCG ACATGACACG ACGATCGAAT CGTTGATGCG ATTGAAGCCG
ATCGTGCACC CAGATGGCAC CGTAACCGCG GGCAACTCAT CTGGCGTCAA TGATGGTGCT
GCAGCCATGC TGATTGCGTC CGAGGCCGCT GCGGTGGCAA ACGGCCTTAC ACCAAGAGCC
CGTGTGGTTG CCATGTCAGC AGCCGGCGTC GCACCGCGGG TAATGGGTAT CGGGCCGGTC
AATGCGGCTC GCAAAGTGCT TAGCCGGGCG GGTTTGGGCC TCGATAATAT CGACGTTATC
GAACTCAACG AAGCCTTTGC CTCACAAGCG CTCGCGGTGC TGCGTGATCT TAAAATTCAA
CCATACGATC AGCGCGTTAA TCCAAATGGG GGAGCAATAG CTCTCGGTCA CCCATTGGGG
ATGTCTGGAG TGCGGCTTGC GTTGACCGCA GTTGAGGAAC TGCACCGCAC TGGTGGTCGT
TATGCGCTCG CGTTCATGTG CGTAGGAGTT GGGCAAGGTA TCGCAATGCT GCTGGAGCGT
GTTTAA
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| Protein sequence | MTEAFICDAV RTPIGRFGGA LSSIRPDDLA AVPLAALKAR NPALDWSRVD DVLFGCANQA
GEDNRNVARM AVLLAGLPVA VPGTTVNRLC GSGLDAVGLA ARSIRAGDAD LMLAGGVESM
SRAPFVMGKA DAPFSRSQKI EDTTIGWRLV NPAMESAYGV DSMPETGENV AKEWGISREA
QDAFALASQA KAAVAQVNGR LAAEIVAVRI PQRKDDFIVI DRDEHPRHDT TIESLMRLKP
IVHPDGTVTA GNSSGVNDGA AAMLIASEAA AVANGLTPRA RVVAMSAAGV APRVMGIGPV
NAARKVLSRA GLGLDNIDVI ELNEAFASQA LAVLRDLKIQ PYDQRVNPNG GAIALGHPLG
MSGVRLALTA VEELHRTGGR YALAFMCVGV GQGIAMLLER V
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