| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5400 |
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| Symbol | |
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| ID | 5195705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 309141 |
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| End bp | 310208 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640579327 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001260275 |
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| Protein GI | 148550836 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0772872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TGATCGCGGC CGTATTGGCT GCGGCGTCCT GCGCATCGAT CGCGCAGGCG
CAAGCACAGG CGCAACAAGC GCCGGTCCCG GCTGCGCCAA CATCGGCACA GCCCATGCCG
GCTTTCACGC TCGATCAGGC CGTGTTGGCG GCAGGTGGGT CGGCACCGGC CAACGCGGCG
GCAGCAGCGG GCATCGAAGC CGCACAGGCT GGACGCTCCG TCGCGGGCCT CCGCCCCAAT
CCGACCTTTC AGGGTCAGGT CGAGAATGTC GTGGGTTCCG GGCCTTATCG GGGGCTGCGG
AGCGCTGAAA CGACGGTCGG GGTTGCGATC CCGATCGAGC TGGGCGGCAA GCGAAGCGCG
CGTGTCGCCG TCGCCGGCGC GCAGCTATCT CGGGCGCAGC TCCAAGCCGC GATCGCAGAG
GCCGATATCC GCGTGCAGGT GACGCAGCTC TATGTCGAGG CGGTCGCGGC CGAACGCCGC
TTGGCGACGG CACGCGACCA AGCCCGGATC GCGGCGGAAG TCCTGCGCGG CGCCGGGGTC
CGCGTTCAGG CGGGCCGGGC ATCGCCGCTC GAACAGCAGC GCGCCGACGT GGCGCGGATC
AACGCGGATG CCAACGTCGA GCGGCTGACG CGGCTTGCGG AGGCGGCCAG GACCAATCTC
GCGCGCCGGA TCGGTCGTCC GATAGATGGC GCGCTGGACG TAACACTGCT CGATCGCCTC
CCTGCCGCGA CCTTCGGGCC GGTCGCCCCG CCAAGTGCGC AAGGCACGCT GGCGCTGGCG
GCGGCCGATG CCGATCTGGC CATCGCCGAC GCCGGCATCC GGCTTGCTCG GGCCAATCGG
GTGCCCGACA TCAACGTCGG ACCGGCGCTG CGGCGACTGG AAGCGACCAA CGACACCGCC
GCGGTGTTCG CGATCTCGAT CCCGATCCCG GTGTTCAACA ATGGCCGGGC CGCCATCGCG
CAGGCGACCG CTGAGCGGAC GCGGGCGGAC GCGGTGCGGC GCGTAACCGC GCTCGATGTC
GAGCAGGCTA TGGGTCGTGC GGCTGAGCGG AACAGGAAAG TGTCATAA
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| Protein sequence | MKKLIAAVLA AASCASIAQA QAQAQQAPVP AAPTSAQPMP AFTLDQAVLA AGGSAPANAA
AAAGIEAAQA GRSVAGLRPN PTFQGQVENV VGSGPYRGLR SAETTVGVAI PIELGGKRSA
RVAVAGAQLS RAQLQAAIAE ADIRVQVTQL YVEAVAAERR LATARDQARI AAEVLRGAGV
RVQAGRASPL EQQRADVARI NADANVERLT RLAEAARTNL ARRIGRPIDG ALDVTLLDRL
PAATFGPVAP PSAQGTLALA AADADLAIAD AGIRLARANR VPDINVGPAL RRLEATNDTA
AVFAISIPIP VFNNGRAAIA QATAERTRAD AVRRVTALDV EQAMGRAAER NRKVS
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