Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5396 |
Symbol | |
ID | 5195737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | + |
Start bp | 303363 |
End bp | 303761 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640579323 |
Product | response regulator receiver protein |
Protein accession | YP_001260271 |
Protein GI | 148550832 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 0.476573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTGCT GTATTACCGA GGATTGCATG ATGGCCGATA GGCAACATGT TTTGGTTGTC GATGACGAGC CGGTGCTCCG GATGATCCTT GTCGATCTCC TGGAGGGCGA GGGATATGCG GTCGAGGAGG CTTCCAACGC CGCCGGAGCT CTTGAAGTCC TGCAGGCGCT GCCCTCGATC CGGATTGTCG TCACCGATAT CCAGATGCCC GGATCGATGG ATGGCTTGCG CCTGGCGCGC TATATTCGCG ATGCCTATCC TCCCATCGCC CTTATCGTTT CCTCAGGCAC CGTTCGGCCC GAGCAAGGCG CGTTGCCCGA CGATGCTGTC TTTCTCTCGA AGCCGGTCGA CCATCGCGAA TTGCTCCGCG TGATTGAGGA CCGCGTCTCG GCCGCCTGA
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Protein sequence | MCCCITEDCM MADRQHVLVV DDEPVLRMIL VDLLEGEGYA VEEASNAAGA LEVLQALPSI RIVVTDIQMP GSMDGLRLAR YIRDAYPPIA LIVSSGTVRP EQGALPDDAV FLSKPVDHRE LLRVIEDRVS AA
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