Gene Swit_5396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5396 
Symbol 
ID5195737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp303363 
End bp303761 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID640579323 
Productresponse regulator receiver protein 
Protein accessionYP_001260271 
Protein GI148550832 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.476573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTGCT GTATTACCGA GGATTGCATG ATGGCCGATA GGCAACATGT TTTGGTTGTC 
GATGACGAGC CGGTGCTCCG GATGATCCTT GTCGATCTCC TGGAGGGCGA GGGATATGCG
GTCGAGGAGG CTTCCAACGC CGCCGGAGCT CTTGAAGTCC TGCAGGCGCT GCCCTCGATC
CGGATTGTCG TCACCGATAT CCAGATGCCC GGATCGATGG ATGGCTTGCG CCTGGCGCGC
TATATTCGCG ATGCCTATCC TCCCATCGCC CTTATCGTTT CCTCAGGCAC CGTTCGGCCC
GAGCAAGGCG CGTTGCCCGA CGATGCTGTC TTTCTCTCGA AGCCGGTCGA CCATCGCGAA
TTGCTCCGCG TGATTGAGGA CCGCGTCTCG GCCGCCTGA
 
Protein sequence
MCCCITEDCM MADRQHVLVV DDEPVLRMIL VDLLEGEGYA VEEASNAAGA LEVLQALPSI 
RIVVTDIQMP GSMDGLRLAR YIRDAYPPIA LIVSSGTVRP EQGALPDDAV FLSKPVDHRE
LLRVIEDRVS AA