Gene Swit_5392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5392 
Symbol 
ID5195837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp300518 
End bp300841 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content67% 
IMG OID640579319 
ProductXRE family transcriptional regulator 
Protein accessionYP_001260267 
Protein GI148550828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.6376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTT CGCAACAGAT GCGTGCGGCT CGCGCCCTTC TCGGGATTGA CCAGCGCCAA 
CTCGCCCAGC TCGCGCAGCT TTCGCTGCCG ACCATCCAGC GCATGGAAGC CTCGGAGGGG
CAAGTTCGCG GCGTGGTCGA CACCTTGGTA AAAGTGATCG GCGCGCTTGA AAGCGCTGGC
ATTGAACTGC TCGGCGAGAA CGCGCCGAGC AGCGGGGTGG GACGCGGCGT GCGCCTGCGC
GAGACGAAGT CCGGTCGCTC CGCCGGCACC GTGCCATCGC TGTTGTACGA CCAGGAAGAG
GCCGGCGCGA CGCCGCCGCA GTGA
 
Protein sequence
MITSQQMRAA RALLGIDQRQ LAQLAQLSLP TIQRMEASEG QVRGVVDTLV KVIGALESAG 
IELLGENAPS SGVGRGVRLR ETKSGRSAGT VPSLLYDQEE AGATPPQ