| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5389 |
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| Symbol | |
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| ID | 5195821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | - |
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| Start bp | 295901 |
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| End bp | 298189 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640579316 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001260264 |
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| Protein GI | 148550825 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGAGG CTCCGTTTCC GCCTTTGCTC GCCGAGGTCC AGTTTCGCGC GGCAGCCCAG
GCTCTGCCCG GCCATGTCTG GACCGCGACG CCCGCCGGCG CCGCCGATTG GTTCAATGAC
CCGCTCTTGT CCTATACCGG ACGCACATCG GACGATCTGC TCGGGGACAA GTGGCTCTCG
ATCGTCCATC CCAATGATCG CGCGGGCGCG GCGCAATGCT GGAAGCAGGC GCTCGGCTCC
GGCGCGGTCT ATGATGCCGA GTTTCGCATT CAGCGCCACG ACGGCGCCTG GATTTGGCAC
CAGGTGCGCG GCACCCCGAT CCGCGATGCG GACGGCGCCA TTGAGCGATG GGTCGGGAGC
ACGATAGACT GCAACCAGCA AAAGCTCATT GAGCTTGCGG CCGATCGCGA CAGGCTATGG
TCGCTCTCAC GCGACCTGAT GCTGGTATGC ACCTTCGACG GTGTGATCAC GGCCATCAAC
CCGAGCGCCA CCACCATGCT GGGATGGAGC GAGGATGAGA TGGTCGGACG GCCGCTTGCC
GAGTTCATTC ATCCTCAGGA CGTCGCGGCG ACCGCCGCCC AGGTCGCAAA GCTGGCGCGC
GGGACAGATA CCCTGTCGTT CGAGAACCGT TACCGGGCGC GGAGCGGTGA CTATCACCTT
CTGGCCTGGA CGGCGGTCCC CGCCGCCGAC CGTATCCACG CGGTCGGCCG CGACGTGACC
GCCGAACGGG AGGTTGTGCG CGACCGGGAG AGGATCTGGG CACTCTCGCC CGTGCTCAAG
CTCGTCACCG ATCGGCAAGG CATCATCGTC GACGTCAATC CGACCCGGAC GAAAGTGCTG
GGCTGGACGC GAGAGGAAGC CGTCGGCAAG TGCAGCGCCG AGTTCATCGT GGGCGACGAC
ATGGCATGGG CCAAGCAGAT CGACAGGCTG GCCTCCGGGA TCCCGCTCGA GGAATATCGC
ACTGTCCTCT TTGCCCGCGA CGGTGCCAAT CGCCTGATCC AGTGGACGAC CGTTCCGGAT
GCCGGGAAAT TCTATGGCTT CGGCCGTGAC ATAACGGCCG AAGTCGAAGG CGCGAAAGCG
CTGGGCGAAG CCGAAGAAGC CCTGCGCCAG GCGCAGAAAA TGGAAGCGGT CGGACAGTTG
ACCGGCGGCA TCGCCCATGA CTTCAACAAT CTGCTGCAAG GCATCAGCGG CAGTCTCGAC
ATCATGCGGC GCAGGATTGC CCAGAACCGA CTGGGTGACA TGGACCGCCT GATCACAATG
GCGTCCGACG CTTCGGCCCG CGCTGCGGCG CTGACCCATC GCCTGCTCGC CTTCTCCCGT
CGTCAGCCCC TCGATCCCAA GCCAGTCGCG ATCAACAGCC TTATCCACTC ACTCGAAGAC
ATGGTTCGCC GCACGCTCGA TGCGGGCATC TCGCTGCGTC TCTCGCTGGC GTCCGATCTG
TGGACCGCGA AATGCGATCC CAACCAACTC GAAAATGCGC TGCTCAATCT CGTGATCAAC
GCGCGAGATG CGATGCCCGC CGGCGGAACG CTGACCATCG CGACCCGCAA CGTGAGCTTC
GAGGCCCCCC TGTCCGAACA GGGCGCAAAG CCCGGGCGAT ATGTCGGATT GGCGGTTACC
GACACCGGGG TCGGCATGGA CGCGGAAACC GTCCGGCGCG CCTTTGAACC GTTTTTCACC
ACCAAGGCCA TGGGCCAGGG CACGGGTCTC GGCCTCTCCA TGGTCTACGG CTTTGCAAGG
CAATCCGAAG GCCATGCCGC CATCGACAGC GCCCCGGGCG ACGGAACGAC ATTCCACCTC
TATCTCCCCT ATCATGCCGC CGCGCTCGAA CCGGAGACGG CGCCCGATGG ACCCTGCCTG
ACAGCTGTCG CGGAAGTGGG CGAAGTGGTG CTCGTGGTGG AAGATGAAGC GATCGTGCGG
ACTTTGGTGG TCGATCAGCT TAGAGAGCTG GGCTATCATG TGCTCCAGGC AGCGGATGGA
CCCGAAGGCG TGGACATCCT CAACTCGTCG CAGGTCATCA ACCTGCTTCT CACCGACATA
GGGCTTCCCG GGATGAACGG GCGCCTGGTC GCCCAAGCGG GCCGGACCTG CCGCCCCGAT
CTCCCGATCC TGTTCATGAC GGGCTATGCG GAGACGGCGA CGCAGGCCGC CGGCTTTCTC
GAGCCAGGCA TGGGTCTGAT CACCAAGCCT TTTGAAATGG AGGTGCTCGC CCAGCGGGTG
CGCGAAACGA TGACCCAGGC GCCCTTGCGC GCCGAGGCGC CAAGTGGTCC CGCGAAGGCG
CCAATCTGA
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| Protein sequence | MPEAPFPPLL AEVQFRAAAQ ALPGHVWTAT PAGAADWFND PLLSYTGRTS DDLLGDKWLS
IVHPNDRAGA AQCWKQALGS GAVYDAEFRI QRHDGAWIWH QVRGTPIRDA DGAIERWVGS
TIDCNQQKLI ELAADRDRLW SLSRDLMLVC TFDGVITAIN PSATTMLGWS EDEMVGRPLA
EFIHPQDVAA TAAQVAKLAR GTDTLSFENR YRARSGDYHL LAWTAVPAAD RIHAVGRDVT
AEREVVRDRE RIWALSPVLK LVTDRQGIIV DVNPTRTKVL GWTREEAVGK CSAEFIVGDD
MAWAKQIDRL ASGIPLEEYR TVLFARDGAN RLIQWTTVPD AGKFYGFGRD ITAEVEGAKA
LGEAEEALRQ AQKMEAVGQL TGGIAHDFNN LLQGISGSLD IMRRRIAQNR LGDMDRLITM
ASDASARAAA LTHRLLAFSR RQPLDPKPVA INSLIHSLED MVRRTLDAGI SLRLSLASDL
WTAKCDPNQL ENALLNLVIN ARDAMPAGGT LTIATRNVSF EAPLSEQGAK PGRYVGLAVT
DTGVGMDAET VRRAFEPFFT TKAMGQGTGL GLSMVYGFAR QSEGHAAIDS APGDGTTFHL
YLPYHAAALE PETAPDGPCL TAVAEVGEVV LVVEDEAIVR TLVVDQLREL GYHVLQAADG
PEGVDILNSS QVINLLLTDI GLPGMNGRLV AQAGRTCRPD LPILFMTGYA ETATQAAGFL
EPGMGLITKP FEMEVLAQRV RETMTQAPLR AEAPSGPAKA PI
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