Gene Swit_5387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5387 
Symbol 
ID5195684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp294041 
End bp294277 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content55% 
IMG OID640579314 
Productacyl carrier protein 
Protein accessionYP_001260262 
Protein GI148550823 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0236] Acyl carrier protein 
TIGRFAM ID[TIGR00517] acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA TTGCTACGCG CGTTGCAAAC CTGGTTGCCC AGCAATTGGG TGTCGACCCC 
GACAAGGTGA GGCCGGAATC CCGCTTCATA GAGGATCTGG GTGCGGACAG TCTGGATGTC
GTCGAACTCG TAATGGCGAT CGAGGAAGGC TTCGACGTCC AGATACCGGA CGATGATGCC
GAGAAGATCG TGACGGTAAG GGATGCCGTT CTCTATATCG AAGCCGCGAT GGTCTAA
 
Protein sequence
MTDIATRVAN LVAQQLGVDP DKVRPESRFI EDLGADSLDV VELVMAIEEG FDVQIPDDDA 
EKIVTVRDAV LYIEAAMV