| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5375 |
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| Symbol | |
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| ID | 5195668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 281573 |
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| End bp | 282226 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640579302 |
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| Product | Type-F conjugative transfer system protein TraW |
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| Protein accession | YP_001260250 |
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| Protein GI | 148550811 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02743] type-F conjugative transfer system protein TraW |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.670393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCGCA CCATCCTGCT GGCGGCGACA ACCGCATGCC TGGGCGGCGC GACCCTGTTT
CTTGTCGGCT CCGCCAGCGA GGCGCGCGAT TATGGAACGG CAGGGCAGGC CTTTCCGATC
ATCGAGCCTG ACCTGCTTGC GACGATCGAG GCGCGGCTGC GCCATGCCGA AGCGAGCGGC
GAACTGGCGC GAACCAATGC GCTCTTCGCC AAGCGGGTTG AGGCCAAGGT CCGGCGGCCT
GATCCCGTCG CCGGTATCTC GCCGGCCCAG GAGACGCGCA GCTGGGATTT CGATCCCTCG
GTTCGCATCG ACCATGATGT CCGCGACCAA AAGGGGAATA TGATCGCAAA GGCCGGTCAG
AAGGTGAACC CGCTCGATTT CGTCGGCATT CATCAGGATC TTGTCTTTGT CGATGGGGAC
AATGCCGAGC AGCTGGACTG GGCCTGCGGC AAATATAGCG ACGTGAAGGC GAAGATCATC
TTCGTGAAGG GATCGCCGAT CGAGGCGATG TCGCAGCGCA AGCGGCGCTT CTATTTCGAC
CAGGAGGGCA AGCTCACCGG TCGCTTCGGC ATCGAGCACA CGCCCGCCGT CGTCAGCCAG
GCGGGCCGTG TGATGCGGGT CACCGAACAT GCGCTCAAGG GGAGGGCGGG CTGA
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| Protein sequence | MTRTILLAAT TACLGGATLF LVGSASEARD YGTAGQAFPI IEPDLLATIE ARLRHAEASG
ELARTNALFA KRVEAKVRRP DPVAGISPAQ ETRSWDFDPS VRIDHDVRDQ KGNMIAKAGQ
KVNPLDFVGI HQDLVFVDGD NAEQLDWACG KYSDVKAKII FVKGSPIEAM SQRKRRFYFD
QEGKLTGRFG IEHTPAVVSQ AGRVMRVTEH ALKGRAG
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