| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_5370 |
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| Symbol | |
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| ID | 5195653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009507 |
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| Strand | + |
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| Start bp | 276403 |
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| End bp | 277416 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640579297 |
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| Product | Type IV conjugative transfer system protein TraV |
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| Protein accession | YP_001260245 |
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| Protein GI | 148550806 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02747] type IV conjugative transfer system lipoprotein TraV |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.312286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG GGAGCCAAGT CGTGAAGGGC CGCGCCACGC ACTGGCATGC TGGCCTGGCG
CTCGCCGTCC TGCCGCTTAT GGGGGGCTGC GCATCGTTCG GCAGCAATAT CGCGGGCAGT
TTTTCCTGCC CTGCGCCGGA CGGAATTTGC GCGCCGTCGT CATCGATCGA CGACCGGGCA
TTGGCCCTCA TCACGGCTGA AGCGCCGGAC GCCGTGCCGT CACCGGCGGG ACCCTATCGC
GATCCCGACA TGGGAGCGGG AAAAGGCGCC CGGACGGCGG TGGCAAGCCC GCGGCGCATG
CCGGTGTCGA TCGGAGAGGC GGGCCGCACG CGTGAGAAAG TGCTGCGGAT CGTCTTCCAG
CCTTATATCG ACGAGCGCGG CCGGCTGCAC GAGGCGAGTG CCGTCCATGC CGTGGTTGCG
CAGGGCGAGT GGCAGCAGCA GGCTATCGCG GACGCGTCTG GCCTCTCCTC CCGCGATGAG
CGCGCGGCGG CCTATGCGGG CGAGACGCTC GCCGACGCGG TCGATCGCGC CGAGACGCAG
CGCCTCTCCT CTGCCGAAGG CCTGCCTGAC CCGGCGGCTG TCGCTGCCGC GCGGGCGCGC
GTGACGGCGG ATCCGGTTGC CAGCATCAAG AGCGATGTCG CGGCCCGGTT GACGCCACGG
CCGGATGCGC GGGCGCGGCG CAAGGTCGCG GCAACGCCAG CGCAACCCGG GAGCGCCCCG
GTTTCGCCCA CCGCGCCGAC TGCTCCTTCC TCAGCAACGG CTGCGCCGCC GGCGCGTGCG
GTCCCGTCGG CTCCGCCGGC TGCGGCAGTC CCTGCCGCTC CTACCAAGAC GACCGCTGGC
GCGGAAGCGG CGGCGCGGGT GAAAGCCGAT AGCCGGTACC AGGCGGTGGC GTCGCAGGCA
CAGGATGGTG CGCGGGCAGC GGCCACGGGC GCGCAGGCGC CCGATCTGCG GCCGGTGCTC
AAGCCCACGG TGAGTTCGGC CCCATTCCCC GGCGCTGTCG CGGAGGAGAA CTGA
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| Protein sequence | MAEGSQVVKG RATHWHAGLA LAVLPLMGGC ASFGSNIAGS FSCPAPDGIC APSSSIDDRA
LALITAEAPD AVPSPAGPYR DPDMGAGKGA RTAVASPRRM PVSIGEAGRT REKVLRIVFQ
PYIDERGRLH EASAVHAVVA QGEWQQQAIA DASGLSSRDE RAAAYAGETL ADAVDRAETQ
RLSSAEGLPD PAAVAAARAR VTADPVASIK SDVAARLTPR PDARARRKVA ATPAQPGSAP
VSPTAPTAPS SATAAPPARA VPSAPPAAAV PAAPTKTTAG AEAAARVKAD SRYQAVASQA
QDGARAAATG AQAPDLRPVL KPTVSSAPFP GAVAEEN
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